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Table 2 Genes identified in the G. barbadense mitochondrial genome

From: Rapid evolutionary divergence of Gossypium barbadense and G. hirsutum mitochondrial genomes

1. Complex I genes

6. Cytochrome c biogenesis genes

11. rRNA genes

   trnP(TGG)

   nad1

   ccmB

   rrn5-1

   trnM(CAT)-cp-1

   nad2

   ccmC

   rrn5-2 a

   trnSup(TTA)-psu-2

   nad3

   ccmFC

   rrn18-1

   trnD(GTC)-cp-2 a

   nad4-1

   ccmFN

   rrn18-2 a

   trnI(TAT)

   nad4-2 a

7. Ribosomal proteins, LSU

   rrn26-1

   trnM(CAT)-cp-2

   nad4L

   rpl2

   rrn26-2

   trnG(GCC)

   nad5

   rpl5

12. tRNA-coding genes

   trnQ(TTG)

   nad6

   rpl10

   trnH(GTG)-cp

   trnP(TGG)-2

   nad7

   rpl16

   trnE(TTC)

   trnF(GAA)-2

   nad9-1

8. Ribosomal proteins, SSU

   trnC(GCA)

   trnS(GCT)-2

   nad9-2 a

   rps3

   trnN(GTT)-cp

 

2. Complex II genes

   rps3-psu

   trnY(GTA)

 

   sdh3

   rps4

   trnM(CAT)

 

   sdh4

   rps7

   trnM(CAT)-1

 

3. Complex III gene

   rps10

   trnSup(TTA)-psu-1

 

   cob

   rps12

   trnD(GTC)-cp-1

 

4. Complex IV genes

   rps14

   trnK(TTT)

 

   cox1

9. Maturase gene

   trnS(TGA)

 

   cox2

   matR

   trnM(CAT)-2

 

   cox3

10. protein translocation system subunit gene

   trnP(TGG)-1

 

5. Complex V genes

   mttB-1

   trnF(GAA)-1

 

   atp1-1

   mttB-2 a

   trnS(GCT)-1

 

   atp1-2 a

 

   trnS(GGA)-cp

 

   atp4

 

   trnW(CCA)-cp-1

 

   atp6

 

   trnD(GTC)

 

   atp8

 

   trnV(GAC)-cp

 

   atp9

 

   trnW(CCA)-cp-2

 
  1. A total of 40 protein-coding genes, 6 rRNA-coding genes and 29 tRNA-coding genes were identified (excluding pseudogenes), in addition to 3 pseudogenes and 10 chloroplast-derived sequences. Genes present in duplicate are denoted with a hyphenated number (e.g., −1 or −2). a represents the second gene copy to G. barbadense