Fig. 3
From: Copy number variations in the genome of the Qatari population
All SNPs within 500 kb of start and end breakpoints of 1,193 deletions were used to detect for each deletion a SNP with the maximum pairwise LD correlation. This was done both for a. all 1193 CNVs and b. for only 422 Genic CNVs. In both cases, the WGS SNVs significantly outperformed the OMNI2.5 M SNPs, especially at higher r2 values. WGS-SNVs: Whole genome sequencing detected variants (●). OMNI2.5 M-SNPs: SNPs present on the OMNI2.5 M array (Ο)