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Table 1 Geneious assembly of 20 BAC clones published by Gao et al. (2010)

From: A comprehensive mapping of the structure and gene organisation in the sheep MHC class I region

Assembled reads

Length (bp)

Reads unused

Length (bp)

Contig 1: 5 Reads

629701

FJ985852

118738

 FJ985856 (f)

127050

FJ985862

167309

 FJ985861 (f)

162317

FJ985865

159959

 FJ985872 (r)

169910

FJ985867

133881

 FJ985857 (r)

165531

  

 FJ985853 (f)

134434

  

Contig 2: 4 Reads

430168

  

 FJ985870 (r)

138311

  

 FJ985864 (f)

142360

  

 FJ985854 (f)

145292

  

 FJ985869 (f)

134643

  

Contig 3: 3 Reads

460095

  

 FJ985875 (f)

173955

  

 FJ985868 (f)

140835

  

 FJ985873 (r)

196844

  

Contig 4: 2 Reads

283944

  

 FJ985874 (r)

141902

  

 FJ985859 (f)

160643

  

Contig 5: 2 Reads

214322

  

 FJ985876 (f)

88495

  

 FJ985866 (f)

155022

  
  1. (f) indicates assembly of sequence in the forward (5′- > 3′) direction. (r) indicates assembly of the reverse complement sequence (3′- > 5′)