TY - JOUR AU - Giovannoni, J. J. PY - 2004 DA - 2004// TI - Genetic regulation of fruit development and ripening JO - Plant Cell VL - 16 UR - https://doi.org/10.1105/tpc.019158 DO - 10.1105/tpc.019158 ID - Giovannoni2004 ER - TY - JOUR AU - Seymour, G. B. AU - Ostergaard, L. AU - Chapman, N. H. AU - Knapp, S. AU - Martin, C. PY - 2013 DA - 2013// TI - Fruit development and ripening JO - Annu Rev Plant Biol VL - 64 UR - https://doi.org/10.1146/annurev-arplant-050312-120057 DO - 10.1146/annurev-arplant-050312-120057 ID - Seymour2013 ER - TY - JOUR AU - Gao, C. AU - Ju, Z. AU - Cao, D. AU - Zhai, B. AU - Qin, G. AU - Zhu, H. PY - 2015 DA - 2015// TI - MicroRNA profiling analysis throughout tomato fruit development and ripening reveals potential regulatory role of RIN on microRNAs accumulation JO - Plant Biotechnol J VL - 13 UR - https://doi.org/10.1111/pbi.12297 DO - 10.1111/pbi.12297 ID - Gao2015 ER - TY - JOUR AU - Bapata, V. A. AU - Trivedib, P. K. AU - Ghoshc, A. AU - Ganapathic, V. A. S. T. R. AU - Nath, P. PY - 2010 DA - 2010// TI - Ripening of fleshy fruit: molecular insight and the role of ethylene JO - Biotechnol Adv VL - 28 UR - https://doi.org/10.1016/j.biotechadv.2009.10.002 DO - 10.1016/j.biotechadv.2009.10.002 ID - Bapata2010 ER - TY - CHAP AU - Clendennen, S. AU - Kipp, P. AU - May, G. AU - AK, K. PY - 1997 DA - 1997// TI - The role of ethylene in banana fruit ripening BT - Biology and biotechnology of the plant hormone ethylene PB - Kluwer Academic Publishers CY - Dordrecht UR - https://doi.org/10.1007/978-94-011-5546-5_19 DO - 10.1007/978-94-011-5546-5_19 ID - Clendennen1997 ER - TY - JOUR AU - Liu, X. AU - Shiomi, S. AU - Nakatsuka, A. AU - Kubo, Y. AU - Nakamura, R. AU - Inaba, A. PY - 1999 DA - 1999// TI - Characterization of ethylene biosynthesis associated with ripening in banana fruit JO - Plant Physiol VL - 121 UR - https://doi.org/10.1104/pp.121.4.1257 DO - 10.1104/pp.121.4.1257 ID - Liu1999 ER - TY - JOUR AU - Elitzur, T. AU - Vrebalov, J. AU - Giovannoni, J. J. AU - Goldschmidt, E. E. AU - Friedman, H. PY - 2010 DA - 2010// TI - The regulation of MADS-box gene expression during ripening of banana and their regulatory interaction with ethylene JO - J Exp Bot VL - 61 UR - https://doi.org/10.1093/jxb/erq017 DO - 10.1093/jxb/erq017 ID - Elitzur2010 ER - TY - JOUR AU - Mbeguie-A-Mbeguie, D. AU - Hubert, O. AU - Fils-Lycaon, B. AU - Chillet, M. AU - Baurens, F. C. PY - 2008 DA - 2008// TI - EIN3-like gene expression during fruit ripening of Cavendish banana (Musa acuminata cv. Grande naine) JO - Physiol Plant VL - 133 UR - https://doi.org/10.1111/j.1399-3054.2008.01083.x DO - 10.1111/j.1399-3054.2008.01083.x ID - Mbeguie-A-Mbeguie2008 ER - TY - JOUR AU - Roy Choudhury, S. AU - Roy, S. AU - Nag, A. AU - Singh, S. K. AU - Sengupta, D. N. PY - 2012 DA - 2012// TI - Characterization of an AGAMOUS-like MADS box protein, a probable constituent of flowering and fruit ripening regulatory system in banana JO - PLoS One VL - 7 UR - https://doi.org/10.1371/journal.pone.0044361 DO - 10.1371/journal.pone.0044361 ID - Roy Choudhury2012 ER - TY - JOUR AU - Shan, W. AU - Kuang, J. F. AU - Chen, L. AU - Xie, H. AU - Peng, H. H. AU - Xiao, Y. Y. PY - 2012 DA - 2012// TI - Molecular characterization of banana NAC transcription factors and their interactions with ethylene signalling component EIL during fruit ripening JO - J Exp Bot VL - 63 UR - https://doi.org/10.1093/jxb/ers178 DO - 10.1093/jxb/ers178 ID - Shan2012 ER - TY - JOUR AU - Xiao, Y. Y. AU - Chen, J. Y. AU - Kuang, J. F. AU - Shan, W. AU - Xie, H. AU - Jiang, Y. M. PY - 2013 DA - 2013// TI - Banana ethylene response factors are involved in fruit ripening through their interactions with ethylene biosynthesis genes JO - J Exp Bot VL - 64 UR - https://doi.org/10.1093/jxb/ert108 DO - 10.1093/jxb/ert108 ID - Xiao2013 ER - TY - JOUR AU - Ba, L. J. AU - Shan, W. AU - Xiao, Y. Y. AU - Chen, J. Y. AU - Lu, W. J. AU - Kuang, J. F. PY - 2014 DA - 2014// TI - A ripening-induced transcription factor MaBSD1 interacts with promoters of MaEXP1/2 from banana fruit JO - Plant Cell Rep VL - 33 UR - https://doi.org/10.1007/s00299-014-1668-6 DO - 10.1007/s00299-014-1668-6 ID - Ba2014 ER - TY - JOUR AU - Ba, L. -. J. AU - Shan, W. AU - Kuang, J. -. f. AU - Feng, B. -. h. AU - Xiao, Y. -. y. AU - Lu, W. -. j. PY - 2014 DA - 2014// TI - The Banana MaLBD (LATERAL ORGAN BOUNDARIES DOMAIN) Transcription Factors Regulate EXPANSIN Expression and Are Involved in Fruit Ripening JO - Plant Mol Biol Rep VL - 32 UR - https://doi.org/10.1007/s11105-014-0720-6 DO - 10.1007/s11105-014-0720-6 ID - Ba2014 ER - TY - JOUR AU - Cuperus, J. T. AU - Fahlgren, N. AU - Carrington, J. C. PY - 2011 DA - 2011// TI - Evolution and functional diversification of MIRNA genes JO - Plant Cell VL - 23 UR - https://doi.org/10.1105/tpc.110.082784 DO - 10.1105/tpc.110.082784 ID - Cuperus2011 ER - TY - JOUR AU - Debat, H. J. AU - Ducasse, D. A. PY - 2014 DA - 2014// TI - Plant microRNAs: recent advances and future challenges JO - Plant Mol Biol Rep VL - 32 UR - https://doi.org/10.1007/s11105-014-0727-z DO - 10.1007/s11105-014-0727-z ID - Debat2014 ER - TY - JOUR AU - Moxon, S. AU - Jing, R. AU - Szittya, G. AU - Schwach, F. AU - Rusholme Pilcher, R. L. AU - Moulton, V. PY - 2008 DA - 2008// TI - Deep sequencing of tomato short RNAs identifies microRNAs targeting genes involved in fruit ripening JO - Genome Res VL - 18 UR - https://doi.org/10.1101/gr.080127.108 DO - 10.1101/gr.080127.108 ID - Moxon2008 ER - TY - JOUR AU - Zuo, J. AU - Zhu, B. AU - Fu, D. AU - Zhu, Y. AU - Ma, Y. AU - Chi, L. PY - 2012 DA - 2012// TI - Sculpting the maturation, softening and ethylene pathway: the influences of microRNAs on tomato fruits JO - BMC Genomics VL - 13 UR - https://doi.org/10.1186/1471-2164-13-7 DO - 10.1186/1471-2164-13-7 ID - Zuo2012 ER - TY - JOUR AU - Zhang, X. AU - Zou, Z. AU - Zhang, J. AU - Zhang, Y. AU - Han, Q. AU - Hu, T. PY - 2011 DA - 2011// TI - Over-expression of sly-miR156a in tomato results in multiple vegetative and reproductive trait alterations and partial phenocopy of the sft mutant JO - FEBS Lett VL - 585 UR - https://doi.org/10.1016/j.febslet.2010.12.036 DO - 10.1016/j.febslet.2010.12.036 ID - Zhang2011 ER - TY - JOUR AU - Gao, Z. AU - Shi, T. AU - Luo, X. AU - Zhang, Z. AU - Zhuang, W. AU - Wang, L. PY - 2012 DA - 2012// TI - High-throughput sequencing of small RNAs and analysis of differentially expressed microRNAs associated with pistil development in Japanese apricot JO - BMC Genomics VL - 13 UR - https://doi.org/10.1186/1471-2164-13-371 DO - 10.1186/1471-2164-13-371 ID - Gao2012 ER - TY - JOUR AU - Zhu, Q. H. AU - Helliwell, C. A. PY - 2011 DA - 2011// TI - Regulation of flowering time and floral patterning by miR172 JO - J Exp Bot VL - 62 UR - https://doi.org/10.1093/jxb/erq295 DO - 10.1093/jxb/erq295 ID - Zhu2011 ER - TY - JOUR AU - Silva, G. F. F. AU - Silva, E. M. AU - Azevedo, M. S. AU - Guivin, M. A. C. AU - Ramiro, D. A. AU - Figueiredo, C. R. PY - 2014 DA - 2014// TI - microRNA156-targeted SPL/SBP box transcription factors regulate tomato ovary and fruit development JO - Plant J VL - 78 UR - https://doi.org/10.1111/tpj.12493 DO - 10.1111/tpj.12493 ID - Silva2014 ER - TY - JOUR AU - Liu, Y. AU - Wang, L. AU - Chen, D. AU - Wu, X. AU - Huang, D. AU - Chen, L. PY - 2014 DA - 2014// TI - Genome-wide comparison of microRNAs and their targeted transcripts among leaf, flower and fruit of sweet orange JO - BMC Genomics VL - 15 UR - https://doi.org/10.1186/1471-2164-15-695 DO - 10.1186/1471-2164-15-695 ID - Liu2014 ER - TY - JOUR AU - Chen, W. AU - Kong, J. AU - Lai, T. AU - Manning, K. AU - Wu, C. AU - Wang, Y. PY - 2015 DA - 2015// TI - Tuning LeSPL-CNR expression by SlymiR157 affects tomato fruit ripening JO - Sci Rep VL - 5 UR - https://doi.org/10.1038/srep07852 DO - 10.1038/srep07852 ID - Chen2015 ER - TY - JOUR AU - Wu, J. AU - Wang, D. AU - Liu, Y. AU - Wang, L. AU - Qiao, X. AU - Zhang, S. PY - 2014 DA - 2014// TI - Identification of miRNAs involved in pear fruit development and quality JO - BMC Genomics VL - 15 UR - https://doi.org/10.1186/1471-2164-15-953 DO - 10.1186/1471-2164-15-953 ID - Wu2014 ER - TY - JOUR AU - Aukerman, M. J. AU - Sakai, H. PY - 2003 DA - 2003// TI - Regulation of flowering time and floral organ identity by a MicroRNA and its APETALA2-like target genes JO - Plant Cell VL - 15 UR - https://doi.org/10.1105/tpc.016238 DO - 10.1105/tpc.016238 ID - Aukerman2003 ER - TY - JOUR AU - Chen, X. PY - 2004 DA - 2004// TI - A microRNA as a translational repressor of APETALA2 in Arabidopsis flower development JO - Science VL - 303 UR - https://doi.org/10.1126/science.1088060 DO - 10.1126/science.1088060 ID - Chen2004 ER - TY - JOUR AU - Karlova, R. AU - Haarst, J. C. AU - Maliepaard, C. AU - Geest, H. AU - Bovy, A. G. AU - Lammers, M. PY - 2013 DA - 2013// TI - Identification of microRNA targets in tomato fruit development using high-throughput sequencing and degradome analysis JO - J Exp Bot VL - 64 UR - https://doi.org/10.1093/jxb/ert049 DO - 10.1093/jxb/ert049 ID - Karlova2013 ER - TY - JOUR AU - D’Hont, A. AU - Denoeud, F. AU - Aury, J. M. AU - Baurens, F. C. AU - Carreel, F. AU - Garsmeur, O. PY - 2012 DA - 2012// TI - The banana (Musa acuminata) genome and the evolution of monocotyledonous plants JO - Nature VL - 488 UR - https://doi.org/10.1038/nature11241 DO - 10.1038/nature11241 ID - D’Hont2012 ER - TY - JOUR AU - Chai, J. AU - Feng, R. AU - Shi, H. AU - Ren, M. AU - Zhang, Y. AU - Wang, J. PY - 2015 DA - 2015// TI - Bioinformatic identification and expression analysis of banana MicroRNAs and their targets JO - PLoS One VL - 10 UR - https://doi.org/10.1371/journal.pone.0123083 DO - 10.1371/journal.pone.0123083 ID - Chai2015 ER - TY - JOUR AU - Wen, J. Z. AU - Liao, J. Y. AU - Zheng, L. L. AU - Xu, H. AU - Yang, J. H. AU - Guan, D. G. PY - 2014 DA - 2014// TI - A contig-based strategy for the genome-wide discovery of microRNAs without complete genome resources JO - PLoS One VL - 9 UR - https://doi.org/10.1371/journal.pone.0088179 DO - 10.1371/journal.pone.0088179 ID - Wen2014 ER - TY - JOUR AU - Reid, M. S. AU - Staby, G. L. PY - 2008 DA - 2008// TI - A Brief History of 1-Methylcyclopropene JO - Hortscience VL - 43 ID - Reid2008 ER - TY - STD TI - Tonutti P, Bonghi C, Ramina A. Modulating effects of ethylene and ethylene inhibitors in the control of fruit ripening. In: Ramina A, Chang C, Giovannoni J, Klee H, Perata P, Woltering E, editors. Advances in Plant Ethylene Research: Proceedings of the 7th International Symposium on the Plant Hormone Ethylene. Dordrecht, The Netherlands: online: Springer; 2007. p. 407–15. ID - ref32 ER - TY - JOUR AU - Eyles, R. P. AU - Williams, P. H. AU - Ohms, S. J. AU - Weiller, G. F. AU - Ogilvie, H. A. AU - Djordjevic, M. A. PY - 2013 DA - 2013// TI - microRNA profiling of root tissues and root forming explant cultures in Medicago truncatula JO - Planta VL - 238 UR - https://doi.org/10.1007/s00425-013-1871-7 DO - 10.1007/s00425-013-1871-7 ID - Eyles2013 ER - TY - JOUR AU - Kong, X. AU - Zhang, M. AU - Xu, X. AU - Li, X. AU - Li, C. AU - Ding, Z. PY - 2014 DA - 2014// TI - System analysis of microRNAs in the development and aluminium stress responses of the maize root system JO - Plant Biotechnol J VL - 12 UR - https://doi.org/10.1111/pbi.12218 DO - 10.1111/pbi.12218 ID - Kong2014 ER - TY - JOUR AU - Lakhotia, N. AU - Joshi, G. AU - Bhardwaj, A. R. AU - Katiyar-Agarwal, S. AU - Agarwal, M. AU - Jagannath, A. PY - 2014 DA - 2014// TI - Identification and characterization of miRNAome in root, stem, leaf and tuber developmental stages of potato (Solanum tuberosum L.) by high-throughput sequencing JO - BMC Plant Biol VL - 14 UR - https://doi.org/10.1186/1471-2229-14-6 DO - 10.1186/1471-2229-14-6 ID - Lakhotia2014 ER - TY - JOUR AU - Song, C. AU - Wang, C. AU - Zhang, C. AU - Korir, N. K. AU - Yu, H. AU - Ma, Z. PY - 2010 DA - 2010// TI - Deep sequencing discovery of novel and conserved microRNAs in trifoliate orange (Citrus trifoliata) JO - BMC Genomics VL - 11 UR - https://doi.org/10.1186/1471-2164-11-431 DO - 10.1186/1471-2164-11-431 ID - Song2010 ER - TY - JOUR AU - Kou, S. J. AU - Wu, X. M. AU - Liu, Z. AU - Liu, Y. L. AU - Xu, Q. AU - Guo, W. W. PY - 2012 DA - 2012// TI - Selection and validation of suitable reference genes for miRNA expression normalization by quantitative RT-PCR in citrus somatic embryogenic and adult tissues JO - Plant Cell Rep VL - 31 UR - https://doi.org/10.1007/s00299-012-1325-x DO - 10.1007/s00299-012-1325-x ID - Kou2012 ER - TY - JOUR AU - Rajagopalan, R. AU - Vaucheret, H. AU - Trejo, J. AU - Bartel, D. P. PY - 2006 DA - 2006// TI - A diverse and evolutionarily fluid set of microRNAs in Arabidopsis thaliana JO - Genes Dev VL - 20 UR - https://doi.org/10.1101/gad.1476406 DO - 10.1101/gad.1476406 ID - Rajagopalan2006 ER - TY - JOUR AU - Morin, R. D. AU - Aksay, G. AU - Dolgosheina, E. AU - Ebhardt, H. A. AU - Magrini, V. AU - Mardis, E. R. PY - 2008 DA - 2008// TI - Comparative analysis of the small RNA transcriptomes of Pinus contorta and Oryza sativa JO - Genome Res VL - 18 UR - https://doi.org/10.1101/gr.6897308 DO - 10.1101/gr.6897308 ID - Morin2008 ER - TY - JOUR AU - Yao, Y. AU - Guo, G. AU - Ni, Z. AU - Sunkar, R. AU - Du, J. AU - Zhu, J. K. PY - 2007 DA - 2007// TI - Cloning and characterization of microRNAs from wheat (Triticum aestivum L.) JO - Genome Biol VL - 8 UR - https://doi.org/10.1186/gb-2007-8-6-r96 DO - 10.1186/gb-2007-8-6-r96 ID - Yao2007 ER - TY - JOUR AU - Pantaleo, V. AU - Szittya, G. AU - Moxon, S. AU - Miozzi, L. AU - Moulton, V. AU - Dalmay, T. PY - 2010 DA - 2010// TI - Identification of grapevine microRNAs and their targets using high-throughput sequencing and degradome analysis JO - Plant J VL - 62 ID - Pantaleo2010 ER - TY - JOUR AU - Qiu, D. AU - Pan, X. AU - Wilson, I. W. AU - Li, F. AU - Liu, M. AU - Teng, W. PY - 2009 DA - 2009// TI - High throughput sequencing technology reveals that the taxoid elicitor methyl jasmonate regulates microRNA expression in Chinese yew (Taxus chinensis) JO - Gene VL - 436 UR - https://doi.org/10.1016/j.gene.2009.01.006 DO - 10.1016/j.gene.2009.01.006 ID - Qiu2009 ER - TY - JOUR AU - Thiebaut, F. AU - Grativol, C. AU - Tanurdzic, M. AU - Carnavale-Bottino, M. AU - Vieira, T. AU - Motta, M. R. PY - 2014 DA - 2014// TI - Differential sRNA regulation in leaves and roots of sugarcane under water depletion JO - PLoS One VL - 9 UR - https://doi.org/10.1371/journal.pone.0093822 DO - 10.1371/journal.pone.0093822 ID - Thiebaut2014 ER - TY - JOUR AU - Liu, H. W. AU - Luo, L. X. AU - Liang, C. Q. AU - Jiang, N. AU - Liu, P. F. AU - Li, J. Q. PY - 2015 DA - 2015// TI - High-throughput sequencing identifies novel and conserved cucumber (Cucumis sativus L.) microRNAs in response to cucumber green mottle mosaic virus infection JO - PLoS One VL - 10 UR - https://doi.org/10.1371/journal.pone.0129002 DO - 10.1371/journal.pone.0129002 ID - Liu2015 ER - TY - JOUR AU - Zhao, C. Z. AU - Xia, H. AU - Frazier, T. P. AU - Yao, Y. Y. AU - Bi, Y. P. AU - Li, A. Q. PY - 2010 DA - 2010// TI - Deep sequencing identifies novel and conserved microRNAs in peanuts (Arachis hypogaea L.) JO - BMC Plant Biol VL - 10 UR - https://doi.org/10.1186/1471-2229-10-3 DO - 10.1186/1471-2229-10-3 ID - Zhao2010 ER - TY - JOUR AU - Meyers, B. C. AU - Axtell, M. J. AU - Bartel, B. AU - Bartel, D. P. AU - Baulcombe, D. AU - Bowman, J. L. PY - 2008 DA - 2008// TI - Criteria for annotation of plant MicroRNAs JO - Plant Cell VL - 20 UR - https://doi.org/10.1105/tpc.108.064311 DO - 10.1105/tpc.108.064311 ID - Meyers2008 ER - TY - JOUR AU - Yu, R. AU - Wang, Y. AU - Xu, L. AU - Zhu, X. AU - Zhang, W. AU - Wang, R. PY - 2015 DA - 2015// TI - Transcriptome profiling of root microRNAs reveals novel insights into taproot thickening in radish (Raphanus sativus L.) JO - BMC Plant Biol VL - 15 UR - https://doi.org/10.1186/s12870-015-0427-3 DO - 10.1186/s12870-015-0427-3 ID - Yu2015 ER - TY - JOUR AU - Bonnet, E. AU - Wuyts, J. AU - Fau Rouze, P. AU - Fau, R. P. AU - Peer, Y. AU - Peer, Y. PY - 2004 DA - 2004// TI - Evidence that microRNA precursors, unlike other non-coding RNAs, have lower folding free energies than random sequences JO - Bioinformatics VL - 20 UR - https://doi.org/10.1093/bioinformatics/bth374 DO - 10.1093/bioinformatics/bth374 ID - Bonnet2004 ER - TY - JOUR AU - Wang, J. W. AU - Czech, B. AU - Weigel, D. PY - 2009 DA - 2009// TI - miR156-regulated SPL transcription factors define an endogenous flowering pathway in Arabidopsis thaliana JO - Cell VL - 138 UR - https://doi.org/10.1016/j.cell.2009.06.014 DO - 10.1016/j.cell.2009.06.014 ID - Wang2009 ER - TY - JOUR AU - Gandikota, M. AU - Birkenbihl, R. P. AU - Hohmann, S. AU - Cardon, G. H. AU - Saedler, H. AU - Huijser, P. PY - 2007 DA - 2007// TI - The miRNA156/157 recognition element in the 3’ UTR of the Arabidopsis SBP box gene SPL3 prevents early flowering by translational inhibition in seedlings JO - Plant J VL - 49 UR - https://doi.org/10.1111/j.1365-313X.2006.02983.x DO - 10.1111/j.1365-313X.2006.02983.x ID - Gandikota2007 ER - TY - JOUR AU - Aharoni, A. AU - Vos, C. H. AU - Wein, M. AU - Sun, Z. AU - Greco, R. AU - Kroon, A. PY - 2001 DA - 2001// TI - The strawberry FaMYB1 transcription factor suppresses anthocyanin and flavonol accumulation in transgenic tobacco JO - Plant J VL - 28 UR - https://doi.org/10.1046/j.1365-313X.2001.01154.x DO - 10.1046/j.1365-313X.2001.01154.x ID - Aharoni2001 ER - TY - JOUR AU - Tsuji, H. AU - Aya, K. AU - Ueguchi-Tanaka, M. AU - Shimada, Y. AU - Nakazono, M. AU - Watanabe, R. PY - 2006 DA - 2006// TI - GAMYB controls different sets of genes and is differentially regulated by microRNA in aleurone cells and anthers JO - Plant J VL - 47 UR - https://doi.org/10.1111/j.1365-313X.2006.02795.x DO - 10.1111/j.1365-313X.2006.02795.x ID - Tsuji2006 ER - TY - JOUR AU - Sorin, C. AU - Declerck, M. AU - Christ, A. AU - Blein, T. AU - Ma, L. AU - Lelandais-Briere, C. PY - 2014 DA - 2014// TI - A miR169 isoform regulates specific NF-YA targets and root architecture in Arabidopsis JO - New Phytol VL - 202 UR - https://doi.org/10.1111/nph.12735 DO - 10.1111/nph.12735 ID - Sorin2014 ER - TY - JOUR AU - Guo, H. S. AU - Xie, Q. AU - Fei, J. F. AU - Chua, N. H. PY - 2005 DA - 2005// TI - MicroRNA directs mRNA cleavage of the transcription factor NAC1 to downregulate auxin signals for arabidopsis lateral root development JO - Plant Cell VL - 17 UR - https://doi.org/10.1105/tpc.105.030841 DO - 10.1105/tpc.105.030841 ID - Guo2005 ER - TY - JOUR AU - Gutierrez, L. AU - Bussell, J. AU - Pacurar, D. AU - Schwambach, J. AU - Pacurar, M. AU - Bellini, C. PY - 2009 DA - 2009// TI - Phenotypic plasticity of adventitious rooting in Arabidopsis is controlled by complex regulation of AUXIN RESPONSE FACTOR transcripts and microRNA abundance JO - Plant Cell VL - 10 UR - https://doi.org/10.1105/tpc.108.064758 DO - 10.1105/tpc.108.064758 ID - Gutierrez2009 ER - TY - CHAP AU - Kumar, R. AU - Sharma, A. K. ED - Nath, P. ED - Bouzayen, M. ED - Pech, J. C. ED - Mattoo, A. K. PY - 2014 DA - 2014// TI - Ethylene perception and signaling in ripening fruit BT - Fruit ripening: physiology, signalling and genomics PB - CABI CY - Croydon ID - Kumar2014 ER - TY - JOUR AU - Wang, Y. AU - Wang, W. AU - Cai, J. AU - Zhang, Y. AU - Qin, G. AU - Tian, S. PY - 2014 DA - 2014// TI - Tomato nuclear proteome reveals the involvement of specific E2 ubiquitin-conjugating enzymes in fruit ripening JO - Genome Biol VL - 15 UR - https://doi.org/10.1186/s13059-014-0548-2 DO - 10.1186/s13059-014-0548-2 ID - Wang2014 ER - TY - JOUR AU - Kevany, B. M. AU - Tieman, D. M. AU - Taylor, M. G. AU - Cin, V. D. AU - Klee, H. J. PY - 2007 DA - 2007// TI - Ethylene receptor degradation controls the timing of ripening in tomato fruit JO - Plant J VL - 51 UR - https://doi.org/10.1111/j.1365-313X.2007.03170.x DO - 10.1111/j.1365-313X.2007.03170.x ID - Kevany2007 ER - TY - JOUR AU - Skottke, K. R. AU - Yoon, G. M. AU - Kieber, J. J. AU - DeLong, A. PY - 2011 DA - 2011// TI - Protein phosphatase 2A controls ethylene biosynthesis by differentially regulating the turnover of ACC synthase isoforms JO - PLoS Genet VL - 7 UR - https://doi.org/10.1371/journal.pgen.1001370 DO - 10.1371/journal.pgen.1001370 ID - Skottke2011 ER - TY - JOUR AU - Carey, A. T. AU - Smith, D. L. AU - Harrison, E. AU - Bird, C. R. AU - Gross, K. C. AU - Seymour, G. B. PY - 2001 DA - 2001// TI - Down-regulation of a ripening-related beta-galactosidase gene (TBG1) in transgenic tomato fruits JO - J Exp Bot VL - 52 ID - Carey2001 ER - TY - JOUR AU - Mazzuca, S. AU - Spadafora, A. AU - Innocenti, A. M. PY - 2006 DA - 2006// TI - Cell and tissue localization of β-glucosidase during the ripening of olive fruit (Olea europaea) by in situ activity assay JO - Plant Sci VL - 171 UR - https://doi.org/10.1016/j.plantsci.2006.07.006 DO - 10.1016/j.plantsci.2006.07.006 ID - Mazzuca2006 ER - TY - JOUR AU - J-h, S. AU - Dong, Y. -. h. AU - C-l, L. AU - Shen, Y. -. y. PY - 2014 DA - 2014// TI - Transcription and enzymatic analysis of beta-glucosidase VvBG1 in grape berry ripening JO - Plant Growth Regul VL - 75 ID - J-h2014 ER - TY - JOUR AU - Hobert, O. PY - 2008 DA - 2008// TI - Gene regulation by transcription factors and microRNAs JO - Science VL - 319 UR - https://doi.org/10.1126/science.1151651 DO - 10.1126/science.1151651 ID - Hobert2008 ER - TY - JOUR AU - Cherian, S. AU - Figueroa, C. R. AU - Nair, H. PY - 2014 DA - 2014// TI - ‘Movers and shakers’ in the regulation of fruit ripening: a cross-dissection of climacteric versus non-climacteric fruit JO - J Exp Bot VL - 65 UR - https://doi.org/10.1093/jxb/eru280 DO - 10.1093/jxb/eru280 ID - Cherian2014 ER - TY - JOUR AU - Tieman, D. M. AU - Ciardi, J. A. AU - Taylor, M. G. AU - Klee, H. J. PY - 2001 DA - 2001// TI - Members of the tomato LeEIL (EIN3-like) gene family are functionally redundant and regulate ethylene responses throughout plant development JO - Plant J VL - 26 UR - https://doi.org/10.1046/j.1365-313x.2001.01006.x DO - 10.1046/j.1365-313x.2001.01006.x ID - Tieman2001 ER - TY - JOUR AU - Yokotani, N. AU - Nakano, R. AU - Imanishi, S. AU - Nagata, M. AU - Inaba, A. AU - Kubo, Y. PY - 2009 DA - 2009// TI - Ripening-associated ethylene biosynthesis in tomato fruit is autocatalytically and developmentally regulated JO - J Exp Bot VL - 60 UR - https://doi.org/10.1093/jxb/erp185 DO - 10.1093/jxb/erp185 ID - Yokotani2009 ER - TY - JOUR AU - Kawashima, C. G. AU - Matthewman, C. A. AU - Huang, S. AU - Lee, B. R. AU - Yoshimoto, N. AU - Koprivova, A. PY - 2011 DA - 2011// TI - Interplay of SLIM1 and miR395 in the regulation of sulfate assimilation in Arabidopsis JO - Plant J VL - 66 UR - https://doi.org/10.1111/j.1365-313X.2011.04547.x DO - 10.1111/j.1365-313X.2011.04547.x ID - Kawashima2011 ER - TY - JOUR AU - Wan, C. Y. AU - Wilkins, T. A. PY - 1994 DA - 1994// TI - A modified hot borate method significantly enhances the yield of high-quality RNA from cotton (Gossypium hirsutum L.) JO - Anal Biochem VL - 223 UR - https://doi.org/10.1006/abio.1994.1538 DO - 10.1006/abio.1994.1538 ID - Wan1994 ER - TY - JOUR AU - Langmead, B. AU - Trapnell, C. AU - Pop, M. AU - Salzberg, S. L. PY - 2009 DA - 2009// TI - Ultrafast and memory-efficient alignment of short DNA sequences to the human genome JO - Genome Biol VL - 10 UR - https://doi.org/10.1186/gb-2009-10-3-r25 DO - 10.1186/gb-2009-10-3-r25 ID - Langmead2009 ER - TY - JOUR AU - Wen, M. AU - Shen, Y. AU - Shi, S. AU - Tang, T. PY - 2012 DA - 2012// TI - miREvo: an integrative microRNA evolutionary analysis platform for next-generation sequencing experiments JO - BMC Bioinformatics VL - 13 UR - https://doi.org/10.1186/1471-2105-13-140 DO - 10.1186/1471-2105-13-140 ID - Wen2012 ER - TY - JOUR AU - Friedlander, M. R. AU - Mackowiak, S. D. AU - Li, N. AU - Chen, W. AU - Rajewsky, N. PY - 2012 DA - 2012// TI - miRDeep2 accurately identifies known and hundreds of novel microRNA genes in seven animal clades JO - Nucleic Acids Res VL - 40 UR - https://doi.org/10.1093/nar/gkr688 DO - 10.1093/nar/gkr688 ID - Friedlander2012 ER - TY - JOUR AU - Wang, L. AU - Feng, Z. AU - Wang, X. AU - Wang, X. AU - Zhang, X. PY - 2010 DA - 2010// TI - DEGseq: an R package for identifying differentially expressed genes from RNA-seq data JO - Bioinformatics VL - 26 UR - https://doi.org/10.1093/bioinformatics/btp612 DO - 10.1093/bioinformatics/btp612 ID - Wang2010 ER - TY - JOUR AU - Storey, J. D. PY - 2003 DA - 2003// TI - The positive false discovery rate: a Bayesian interpretation and the q-value JO - Ann Statist VL - 31 UR - https://doi.org/10.1214/aos/1074290335 DO - 10.1214/aos/1074290335 ID - Storey2003 ER - TY - JOUR AU - Wu, H. J. AU - Ma, Y. K. AU - Chen, T. AU - Wang, M. AU - Wang, X. J. PY - 2012 DA - 2012// TI - PsRobot: a web-based plant small RNA meta-analysis toolbox JO - Nucleic Acids Res VL - 40 UR - https://doi.org/10.1093/nar/gks554 DO - 10.1093/nar/gks554 ID - Wu2012 ER - TY - JOUR AU - Chen, L. AU - Zhong, H. Y. AU - Kuang, J. F. AU - Li, J. G. AU - Lu, W. J. AU - Chen, J. Y. PY - 2011 DA - 2011// TI - Validation of reference genes for RT-qPCR studies of gene expression in banana fruit under different experimental conditions JO - Planta VL - 234 UR - https://doi.org/10.1007/s00425-011-1410-3 DO - 10.1007/s00425-011-1410-3 ID - Chen2011 ER - TY - JOUR AU - Varkonyi-Gasic, E. AU - Wu, R. AU - Wood, M. AU - Walton, E. F. AU - Hellens, R. P. PY - 2007 DA - 2007// TI - Protocol: a highly sensitive RT-PCR method for detection and quantification of microRNAs JO - Plant Methods VL - 3 UR - https://doi.org/10.1186/1746-4811-3-12 DO - 10.1186/1746-4811-3-12 ID - Varkonyi-Gasic2007 ER -