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Table 2 Numbers of reads for each small RNA classification identified

From: Identification of miRNAs involved in fruit ripening in Cavendish bananas by deep sequencing

Read types Small libraries Average
Control Ethylene 1-MCP
Total 4,244,311 (100 %) 9,011,022 (100 %) 2,654,040 (100 %) 5,303,124
Sequences mapped to genome 3,504,905 (82.58 %) 7,779,447 (86.33 %) 2,253,332 (84.9 %) 4,512,561
Known_miRNA 84,534 (1.99 %) 278,076 (3.09 %) 79,887 (3.01 %) 147,499
Novel_miRNA 6,569 (0.15 %) 24,746 (0.27 %) 5,232 (0.20 %) 12,182
NAT 335,003 (7.89 %) 982,987 (10.91 %) 192,444 (7.25 %) 503,478
TAS 107 (0.00 %) 120 (0.00 %) 77 (0.00 %) 101
rRNA etca 368,684 (8.69 %) 1,189,320 (13.20 %) 252,346 (9.51 %) 603,450
Repeat 195,636 (4.61 %) 389,021 (4.32 %) 95,972 (3.62 %) 226,876
Exon_sense 63,740 (1.50 %) 247,752 (2.75 %) 43,521 (1.64 %) 118,337
Exon_antisense 20,298 (0.48 %) 50,874 (0.56 %) 13,656 (0.51 %) 28,276
Intron_sense 62,933 (1.48 %) 131,964 (1.46 %) 31,316 (1.18 %) 75,404
Intron_antisense 58,311 (1.37 %) 124,767 (1.38 %) 31,022 (1.17 %) 71,366
Un_annotated 2,309,090 (54.4 %) 4,359,820 (48.38 %) 1,507,859 (56.81 %) 2,725,590
  1. arRNA/snRNA/snoRNA/tRNA considered; TAS trans-acting small interfering RNA, NAT natural antisense short interfering RNA