Table 2 Numbers of reads for each small RNA classification identified

Total

4,244,311 (100 %)

9,011,022 (100 %)

2,654,040 (100 %)

5,303,124

Sequences mapped to genome

3,504,905 (82.58 %)

7,779,447 (86.33 %)

2,253,332 (84.9 %)

4,512,561

Known_miRNA

84,534 (1.99 %)

278,076 (3.09 %)

79,887 (3.01 %)

147,499

Novel_miRNA

6,569 (0.15 %)

24,746 (0.27 %)

5,232 (0.20 %)

12,182

NAT

335,003 (7.89 %)

982,987 (10.91 %)

192,444 (7.25 %)

503,478

TAS

107 (0.00 %)

120 (0.00 %)

77 (0.00 %)

101

rRNA etc^a

368,684 (8.69 %)

1,189,320 (13.20 %)

252,346 (9.51 %)

603,450

Repeat

195,636 (4.61 %)

389,021 (4.32 %)

95,972 (3.62 %)

226,876

Exon_sense

63,740 (1.50 %)

247,752 (2.75 %)

43,521 (1.64 %)

118,337

Exon_antisense

20,298 (0.48 %)

50,874 (0.56 %)

13,656 (0.51 %)

28,276

Intron_sense

62,933 (1.48 %)

131,964 (1.46 %)

31,316 (1.18 %)

75,404

Intron_antisense

58,311 (1.37 %)

124,767 (1.38 %)

31,022 (1.17 %)

71,366

Un_annotated

2,309,090 (54.4 %)

4,359,820 (48.38 %)

1,507,859 (56.81 %)

2,725,590