Comparison of Xenorhabdus bovienii bacterial strain genomes reveals diversity in symbiotic functions

BMC Genomics

Table 1 Xenorhabdus bovienii genomes used in this study^a

Genome^a	Steinernema nematode host^b	Source^c	Genome Accession^d Number^d	Study^e	Genome Size (Mb)^f	G + C content (%)^g	Number of CDS^h	Coding Density (%)ⁱ	Number of Contigs^j	N50 Value (Kb)^k
Xb-Sf-FL	S. feltiae	Florida, USA	[EMBL:PRJEB432]	5	4.47	44.89	4508	83.43	436	45
Xb-Sf-FR	S. feltiae	France	[EMBL:PRJEB4319]	5	4.41	44.75	4441	84.06	449	45
Xb-Sf-MD	S. feltiae	Moldova	[EMBL:PRJEB4321]	5	4.66	44.36	4695	83.82	397	52
Xb-Si	S. intermedium	North Carolina, USA	[EMBL:PRJEB4327]	5	4.71	44.89	4719	83.39	467	51
Xb-Sj	S. jollieti	Monsanto	[EMBL:PRJEB4326]	5	3.93	44.48	3939	83.20	457	46
Xb-Sj-2000	S. jollieti	Monsanto	[EMBL:FN667741]	31	4.23	44.97	4406	84.07	1	NA
Xb-Sk-BU	S. kraussei	Becker Underwood	[EMBL:PRJEB4325]	5	4.72	44.75	4860	83.10	752	33
Xb-Sk-CA	S. kraussei	Quebec, CA	[EMBL:PRJEB4324]	5	4.21	44.18	4097	83.96	422	34
Xb-So	S. oregonense	Oregon, USA	[EMBL:PRJEB4323]	5	4.13	44.90	4261	84.30	429	51
Xb-Sp	S. puntauvense	Costa Rica	[EMBL:PRJEB4322]	5	4.48	44.32	4584	84.34	443	51

^aAbbreviation used for bacterial genomes
^bThe Steinernema nematode host species from which the X. bovienii bacterial strain was isolated
^cThe location or company from which the nematode was obtained
^dThe accession number for the bacterial genome in EMBL
^eStudy in which the genome sequence was originally reported. Number corresponds to the citation
^fSize of the genome in megabases
^gGC content percentage of the genome
^hTotal number of coding sequences in the genome
ⁱAmount of the genome that is coding sequences
^jNumber of contigs in the genome sequence
^kMedian size of the contigs in megabases. NA indicates not applicable for the finished genome

ISSN: 1471-2164