Skip to main content

Table 1 Functional annotation clustering analysis for the 107 genes associated with the eggshell membranes

From: Identifying specific proteins involved in eggshell membrane formation using gene expression analysis and bioinformatics

 

GO Terms

P-valuea

Identified genesb

Two Identified Clusters

Cluster 1

GO:0006412 ~ translation

3.39E-07

EEF1B2, RPL31, RPL21, RPS23, RPS24, EIF4A2, EIF3D, MARS2, EPRS, RPL3, EEF1D, RPL11

   E-scorec 2.23

GO:0003735 ~ structural constituent of ribosome

1.57E-03

RPL31, RPL21, RPS23, RPS24, RPL3, RPL11

GO:0005198 ~ structural molecule activity

5.33E-02

FBN1, RPL31, RPL21, RPS23, RPS24, RPL3, RPL11

Cluster 2

GO:0003723 ~ RNA binding

1.11E-02

PUM2, EIF4A2, MBNL1, PABPC1, HDLBP, CUGBP2, YBX1

   E-score 1.14

GO:0008380 ~ RNA splicing

5.18E-02

MBNL1, CUGBP2, YBX1

Enriched GO Term

 

GO:0008135 ~ translation factor activity, nucleic acid binding

7.35E-03

EEF1B2, EIF4A2, EIF3D, EEF1D

  1. a P-value corresponds to the EASE score determined by the DAVID software
  2. bGene IDs corresponding to transcripts associated with the eggshell membranes (Additional file 1)
  3. cE-score: enrichment score determined by the DAVID software