|
Number of Fve-lncRNAs with homologs in other species
|
Number of Arabidopsis lncRNAs with homologs in other species
|
Total lncRNAs in other species
|
Other Species
|
Reference for lncRNA-identification in other species
|
|---|
|
0/0
|
-/-
|
6,480
|
Arabidopsis
|
Liu et al. [31]
|
|
0/0
|
0/0
|
2,492
|
Maize
|
Boerner and McGinnis [30]
|
|
0/0
|
0/0
|
1,704
|
Maize (hc-lncRNAs)
|
Li et al. [32]
|
|
1/1
|
5/27
|
18,459
|
Maize (pre-lncRNAs)
|
|
0/0
|
5/9
|
2,224
|
Rice
|
Zhang et al. [35]
|
|
-/-
|
0/0
|
5,884
|
Fragaria vesca
|
This wrok
|
|
49/37
|
2/2
|
4,301
|
Malus-unigene
|
This work
|
|
19/7
|
0/0
|
1,315
|
Prunus-unigene
|
This work
|
- Notes:
- Column 1 shows the number of Fve-lncRNAs with homologs in other (non-Fragaria) species listed in column 4. The number before ‘/’ refers to lncRNA number in Fragaria and the number after ‘/’ refers to the number of lncRNA in the target (non-Fragaria) species. The numbers in column 1 were derived from blast searches using strawberry lncRNAs as queries against the target species. The blast E-value cutoff is < 0.001. The second column shows results using Arabidopsis lncRNAs as queries against corresponding target species. No blast was performed against the query itself and hence was marked as ‘-/-’
