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Table 1 Order Myxococcales – genome properties, taxonomy and ecology

From: Genome-wide analysis of myxobacterial two-component systems: genome relatedness and evolutionary changes

Organism

Size (Mbp)

Contigs

Proteins

%GC

Sub-order

Family

Fruits

Environment

Sequencing centre

Reference

Myxococcus xanthus DK1622 (Mx)

9.1

1

7316

68.9

Cystobacterineae

Myxococcaceae

Yes

Aerobic, terrestrial mesophile

The Institute for Genomic Research

[52]

Myxococcus fulvus HW-1 (Mf)

9.0

2a

7284

70.6

Cystobacterineae

Myxococcaceae

Yes

Aerobic, aquatic mesophile

Shandong University, China

[26]

Corallococcus coralloides DSM 2259 (Cc)

10.1

1

8033

69.9

Cystobacterineae

Myxococcaceae

Yes

Aerobic, terrestrial mesophile

Max Planck Institute, Marburg

[53]

Stigmatella aurantiaca DW4/3-1 (Sa)

10.3

1

8352

67.5

Cystobacterineae

Cystobacteraceae

Yes

Aerobic, terrestrial mesophile

Max Planck Institute, Marburg

[21]

Anaeromyxobacter sp. Fw109-5 (AF)

5.3

1

4466

73.5

Cystobacterineae

Myxococcaceae

No

Anaerobic, terrestrial mesophile

Department of Energy Joint Genome Institute

ncbi.nlm.nih.gov

Anaeromyxobacter sp. K (AK)

5.1

1

4457

74.8

Cystobacterineae

Myxococcaceae

No

Anaerobic, terrestrial mesophile

Department of Energy Joint Genome Institute

ncbi.nlm.nih.gov

Anaeromyxobacter dehalogenans 2CP-C (AdC)

5.0

1

4346

74.9

Cystobacterineae

Myxococcaceae

No

Facultative, terrestrial mesophile

Department of Energy Joint Genome Institute

[54]

Anaeromyxobacter dehalogenans 2CP-1 (Ad1)

5.0

1

4473

74.7

Cystobacterineae

Myxococcaceae

No

Facultative, terrestrial mesophile

Department of Energy Joint Genome Institute

[55]

Sorangium cellulosum So ce 56 (Sc)

13.0

1

9374

71.4

Sorangiineae

Polyangiaceae

Yes

Aerobic, terrestrial mesophile

Bielefeld University.

[56]

Chondromyces apiculatus DSM 436 (Ca)

9.4

128

7633

69.2

Sorangineae

Polyangiaceae

Yes

Aerobic, terrestrial mesophile

Institute of Microbial Technology

ncbi.nlm.nih.gov

Haliangium ochraceum DSM 14365 (Ho)

9.4

1

6719

69.5

Nannocystineae

Kofleriaceae

Yes

Aerobic, marine mesophile

Department of Energy Joint Genome Institute

[57]

Plesiocystis pacifica SIR-1 (Pp)

10.6

238

8450

70.7

Nannocystineae

Nannocystaceae

Yes

Aerobic, marine mesophile

J. Craig Venter Institute

[58]

Bdellovibrio bacteriovorus HD100 (Bb)

3.8

1

3586

50.6

Bdellovibrionaceae

Bdellovibrio

No

Aerobic, multiple habitat mesophile

Max Planck Institute, Tübingen

[59]

  1. Myxobacterial genomes are generally large, with a characteristically high %GC. Bdellovibrio bacteriovorus HD100 is included as a representative of the bdellovibrios – the closest known relatives of the myxobacteria
  2. aThe M. fulvus genome includes a plasmid, which encodes no TCS proteins