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Table 2 Number of ETS-SSRs found in the IUCN plant genera containing EST sequences in the dbEST

From: Mining microsatellite markers from public expressed sequence tags databases for the study of threatened plants

Taxonomic groups Ng Ng SSR NEST Dinucleotides Trinucleotides Tetranucleotides Pentanucleotides Hexanucleotides Total Commonest motifs
Florideophyceae 2 2 16645 2 10 2 1 10 25 ACG/GGC
Charophyceae 1 1 88280 16 77 39 38 30 200 AG/TGA
Acrogymnospermae 18 15 1191184 144 145 30 58 193 570 AG/AT/CAG
Lycopodiophyta 3 3 101292 20 122 15 7 26 190 AG/CAG/TGA
Monilophyta 5 3 35665 129 18 3 2 6 158 AG/TGA
Magnoliidae 5 5 68569 193 89 11 9 30 332 AG/AT/CAG
Monocotyledoneae 58 37 3197142 598 1395 296 323 496 3108 AG/AT/AAG/CGG
Eudicotyledoneae 165 127 9742277 4160 4820 760 769 2010 12519 AG/AT/AAG/TGA
Total 257 193 14498726 5262 6676 1156 1207 2801 17102  
  1. Ng number of genera, Ng SSR , N EST number of EST sequences downloaded, number of genera with SSRs