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Table 1 RNA-Seq data of genes selected for validation by RT-qPCR. Listed are genes sorted according to their log2 fold change

From: High-throughput mRNA and miRNA profiling of epithelial-mesenchymal transition in MDCK cells

Gene ID

Gene name

log2 fold change

p value

MDCK:

   

ENSCAFG00000031946

CLDN2

−6.259056032

5.47E-12

ENSCAFG00000016608

SLIT2

−6.215152318

4.30E-13

ENSCAFG00000013287

MAPK4

−6.192289989

1.03E-29

ENSCAFG00000001015

ANXA13

−5.819849287

2.37E-08

ENSCAFG00000001531

SMO

−5.748090387

1.31E-20

ENSCAFG00000011532

EGF

−5.740353485

6.84E-27

ENSCAFG00000001403

PODXL

−4.106838157

4.13E-11

ENSCAFG00000010602

ELF3

−3.946262741

8.64E-31

ENSCAFG00000020397

CDH16

−2.380998977

1.40E-09

ENSCAFG00000020305

CDH1

−1.352645238

0.000860681

MDCK-Ras:

   

ENSCAFG00000007923

MSC

7.653897777

9.15E-05

ENSCAFG00000006138

LUM

7.532307731

3.38E-10

ENSCAFG00000015054

MMP1

7.288819658

2.01 E-07

ENSCAFG00000006766

DLC1

7.217480395

6.66E-14

ENSCAFG00000029321

WNT5A

7.06017597

6.47E-06

ENSCAFG00000007673

MMP14

7.008651621

2.60E-14

ENSCAFG00000002525

COL15A1

6.927033269

2.69E-09

ENSCAFG00000011197

SULF1

6.905784034

6.41 E-09

ENSCAFG00000005497

ZEB2

6.753561154

5.82E-13

ENSCAFG00000017943

ANXA6

6.741711305

6.71 E-64

ENSCAFG00000004023

ZEB1

6.167816343

7.14E-16

ENSCAFG00000002528

TGFBR1

4.97741794

4.72E-37

ENSCAFG00000006638

SNAI2

4.785172701

4.54E-07

ENSCAFG00000011499

SNAI1

1.367598098

0.035198575