Reconstruction and analysis of the genome-scale metabolic model of schizochytrium limacinum SR21 for docosahexaenoic acid production

Table 1 Features of the in silico genome-scale metabolic model of S. limacinum, M. alpina and Y. lipolytica

Features	iCY1170_DHA	iCY1106	iYL619_PCP
Genome feature
Genome size (Mb)	60.93	38.38	20.50
Open reading frames (ORFs)	14,859	11,631	6453
In silico metabolic model
Reactions included in the model	1769	1854	1142
Biochemical reactions	1386	1391	781
Transport reactions	195	247	236
Exchange reactions	188	216	125
Metabolites	1659	1732	843
ORFs assigned in metabolic model	1170	1106	619
ORF coverage^a (%)	7.9	9.5	9.6

^aThe number of ORFs in the iCY1170_DHA model divided by the total number of ORFs in the genome

ISSN: 1471-2164