Carbon source |
In vivo
|
In silico
a
|
In silico
b
| Reference |
---|
Glucose | + | + | + | [6, 21, 22] |
Fructose | + | + | + | [6, 21, 22] |
Mannose | + | + | + | [21, 22] |
Galactose | + | + | + | [21, 22] |
Xylose | + | - | + | [21, 22] |
Arabinose | + | - | + | [21, 22] |
Ribose | + | + | + | [21, 22] |
Lactose | + | - | + | [6, 21, 22] |
Sucrose | + | + | + | [21, 22] |
Maltose | + | + | + | [6, 21, 22] |
Starch | + | - | + | [6, 21, 22] |
Glycerol | + | + | + | [6, 21, 22] |
Melibiose | + | + | + | [21] |
Raffinose | + | + | + | [21] |
Trehalose | + | - | + | [21] |
Nitrogen Source
| Â | Â | Â | Â |
NH4
+
| + | + | + | [6] |
NO3
−
| + | - | + | [6] |
Urea | + | + | + | [6, 21] |
-
aBefore filling gaps; bAfter filling gaps. To make the GSMM consistent with experimental data, some missing reactions were added to model