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Table 2 Percentages of reads mapping to the reference genome

From: Whole transcriptome analysis of Penicillium digitatum strains treatmented with prochloraz reveals their drug-resistant mechanisms

Sample name PdE3_MI PdE3_NI PdF6_MI PdF6_NI
Total reads 40462740 44233860 43540794 47325648
Total mapped 37182159 (91.89 %) 40670207 (91.94 %) 40389548 (92.76 %) 44003316 (92.98 %)
Multiple mapped 268916 (0.66 %) 284883 (0.64 %) 517276 (1.19 %) 437468 (0.92 %)
Uniquely mapped 36913243 (91.23 %) 40385324 (91.3 %) 39872272 (91.57 %) 43565848 (92.06 %)
Read-1 18514101 (45.76 %) 20278703 (45.84 %) 19998128 (45.93 %) 21861625 (46.19 %)
Read-2 18399142 (45.47 %) 20106621 (45.46 %) 19874144 (45.64 %) 21704223 (45.86 %)
Reads map to ‘ + ’ 18438317(45.57 %) 20164702 (45.59 %) 19923475 (45.76 %) 21777326 (46.02 %)
Reads map to ‘-’ 18474926 (45.66 %) 20220622 (45.71 %) 19948797 (45.82 %) 21788522 (46.04 %)
Non-splice reads 30579359 (75.57 %) 33256246 (75.18 %) 33435379 (76.79 %) 36873244 (77.91 %)
Splice reads 6333884 (15.65 %) 7129078 (16.12 %) 6436893 (14.78 %) 6692604 (14.14 %)