Genome-wide identification and characterization of the superoxide dismutase gene family in Musa acuminata cv. Tianbaojiao (AAA group)

Table 1 Characteristics of the SOD genes from M.acuminata cv. Tianbaojiao

Gene name	cDNA				Protein			gDNA
Gene name	Accession NO.	5’UTR,bp	3’UTR^a,bp	ORF,bp	Length,aa	Molecular weight,kDa	pI	Length^b,bp	Accession NO.
MaCSD1A-1	JQ411718	11	210	483	160	16.4	6.82	2891	KM017525
MaCSD1A-2	JQ411719	14	205	483	160	16.3	6.85	2863	KM017524
MaCSD1B-1	JX948788	134	208	459	152	15.2	5.47	2854	KM017526
MaCSD1B-2	KM017523	82	-	459	152	15.2	5.47	2854	KM017526
MaCSD1B-3	KM017516	79	-	459	152	15.2	5.47	2854	KM017526
MaCSD1C	JX948789	66	184	459	152	15.0	5.82	2341	KM017514
MaCSD1D	KC007552	65	187	459	152	15.5	4.87	1807	KM017512
MaCSD2A-1	JX519461	82	227	684	227	23.1	6.11	4651	KM017515
MaCSD2A-2	KM017517	22	167	684	227	23.1	6.11	4651	KM017515
MaCSD2B	KJ739805	45	276	675	224	22.7	7.16	3887	KM017513
MaMSD1A-1	JX519462	27	194	717	238	26.3	7.09	4447	KM017530
MaMSD1A-2	KM017528	-	156	717	238	26.3	7.09	4447	KM017530
MaMSD1A-3	KM017536	-	141	717	238	26.3	7.09	4447	KM017530
MaMSD1A-4	KM017529	-	116	717	238	26.3	7.09	4447	KM017530
MaMSD1B-1	JQ364939	65	177	732	243	26.5	6.75	3030	KM017531
MaMSD1B-2	KM017534	-	156	732	243	26.5	6.75	3030	KM017531
MaMSD1B-3	KM017535	-	112	732	243	26.5	6.75	3030	KM017531
MaMSD1C-1	JX844024	25	233	738	245	26.8	7.90	4720	KM017532
MaMSD1C-2	KM017527	-	213	738	245	26.8	7.90	-	-
MaMSD1D	KJ739806	44	223	732	243	26.4	6.76	3121	KM017533
MaFSD1A-1	JX535809	26	245	906	301	34.2	5.66	4080	KM017518
MaFSD1A-2	KM017520	-	223	906	301	34.2	5.66	4080	KM017518
MaFSD1A-3	KM017521	-	189	906	301	34.2	5.66	4080	KM017518
MaFSD1B	KJ739807	70	453	783	260	29.9	6.75	4208	KM017519
MaFSD1B-variant1	KM017522	-	-	687	228	26.2	7.01	3853	KM017519

ISSN: 1471-2164