Table 1 Summary for the sequencing outcomes and the results of transcriptome assembly
Sample | 0Â h | 2Â h | 6Â h | 12Â h | 24Â h | |
|---|---|---|---|---|---|---|
Clean data (Gbp) | 1.635 | 1.875 | 1.846 | 1.856 | 1.952 | |
Percentage of total data (%) | 95.86 | 96.13 | 95.4 | 96.43 | 96 | |
GC (%) | 49.22 | 48.86 | 49.00 | 47.61 | 47.69 | |
Q20 (%) | 97.77 | 97.84 | 97.61 | 97.93 | 97.87 | |
Contigs | Count | 690,116 | 673,180 | 776,412 | 687,076 | 781,156 |
N50 Length (bp) | 100 | 139 | 109 | 159 | 150 | |
Mean Length (bp) | 91 | 103 | 97 | 109 | 106 | |
Transcripts | Count | 48841 | 53,115 | 51,823 | 75,284 | 101,027 |
N50 Length (bp) | 1190 | 1623 | 1432 | 1891 | 2028 | |
Mean Length (bp) | 825 | 1066 | 944 | 1234 | 1343 | |
Unigenes | Count | 27,048 | 30,290 | 30,655 | 33,455 | 36,690 |
N50 Length (bp) | 1078 | 1504 | 1357 | 1607 | 1566 | |
Mean Length (bp) | 737 | 915 | 856 | 916 | 876 | |
Total Length (Mbp) | 19.80 | 27.71 | 26.24 | 30.64 | 32.13 | |