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Table 3 Differences between AUPRC of VariantMetaCaller and BAYSIC in case of each human chromosome

From: VariantMetaCaller: automated fusion of variant calling pipelines for quantitative, precision-based filtering

Type Aligner Nr. of chromosomes a P-value b
SNP BWA 21 5.96×10−7
SNP Bowtie 2 22 2.15×10−5
Indel BWA 19 5.33×10−5
Indel Bowtie 2 21 3.93×10−6
  1. aNumber of chromosomes for which the AUPRC of VariantMetaCaller was greater than of BAYSIC
  2. bComputed with one-tailed, paired Wilcoxon test