Table 3 Genes involved in regulatory mechanisms in response to nitrogen limitation in M. smegmatis mc2155
From: Defining the nitrogen regulated transcriptome of Mycobacterium smegmatis using continuous culture
mc2155 locusa | Expression ratiob | FDRc | Description |
|---|---|---|---|
msmeg_1082 | 7.04 | 1.06E-08 | two-component regulator HTH luxR-type DNA binding domain |
msmeg_3997 | 3.46 | 4.55E-15 | regulatory protein |
msmeg_5731 | 3.44 | 1.87E-07 | GntR family transcriptional regulator |
msmeg_1597 | 3.29 | 1.59E-14 | transcription factor WhiB |
msmeg_6236 | 3.27 | 1.32E-12 | two-component system - regulatory protein |
msmeg_6238 | 2.80 | 2.81E-10 | two-component system - sensor kinase |
msmeg_2427 | 3.19 | 2.01E-14 | PII uridylyl-transferase |
msmeg_2426 | 2.18 | 5.48E-07 | nitrogen regulatory protein PII |
msmeg_4006 | 3.11 | 1.56E-08 | CdaR family transcriptional regulator |
msmeg_4368 | 3.11 | 1.49E-13 | regulatory protein - FmdB family |
msmeg_3297 | 2.78 | 1.21E-05 | CadC family transcriptional regulator |
msmeg_3298 | 2.36 | 4.75E-03 | response regulator receiver domain-containing protein |
msmeg_6198 | 2.41 | 1.85E-05 | DNA-binding protein |
msmeg_6824 | 2.16 | 1.03E-02 | MarR family transcriptional regulator |
msmeg_0778 | 2.11 | 1.33E-02 | transcriptional regulator |
msmeg_1420 | 2.07 | 1.46E-02 | transcriptional regulatory protein |
msmeg_5673 | 0.49 | 9.39E-05 | transcriptional regulator |
msmeg_3177 | 0.49 | 4.19E-02 | transcriptional regulatory protein |
msmeg_4394 | 0.48 | 5.57E-04 | LysR family transcriptional regulator |
msmeg_6789 | 0.45 | 2.14E-02 | GntR family transcriptional regulator |
msmeg_0473 | 0.38 | 2.21E-04 | LuxR family transcriptional regulator |
msmeg_5987 | 0.35 | 9.99E-03 | two-component regulator |
msmeg_6555 | 0.33 | 6.11E-07 | TetR family transcriptional regulator |
msmeg_0051 | 0.31 | 1.59E-05 | transcription factor WhiB family protein |
msmeg_1953 | 0.27 | 1.77E-06 | transcription factor WhiB |
msmeg_0622 | 0.19 | 4.57E-08 | DNA-binding protein |