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Table 2 Log2FC for genes belonging to select KEGG pathways relating to oxidative stress reduction and/or pigment production

From: Insights into transcriptional changes that accompany organelle sequestration from the stolen nucleus of Mesodinium rubrum

KO

KN id

log2FC

KO description

Pathway

K01885

46,213

2.97

EARS, gltX; glutamyl-tRNA synthetase

Porphyrin & chlorophyll metabolism

K02492

12,431

3.72

hemA; glutamyl-tRNA reductase

Porphryin & chlorophyll metabolism

K01845

20,139

1.64

hemL; glutamate-1-semialdehyde 2,1-aminomutase

Porphryin & chlorophyll metabolism

K01698

9382

1.49

hemB, ALAD; porphobilinogen synthase

Porphryin & chlorophyll metabolism

K01749

22,375

1.43

hemC, HMBS; hydroxymethylbilane synthase

Porphryin & chlorophyll metabolism

K00589

15,072

−0.01

MET1; uroporphyrin-III C-methyltransferase

Porphryin & chlorophyll metabolism

K01599

31,220

3.08

hemE, UROD; uroporphyrinogen decarboxylase

Porphryin & chlorophyll metabolism

K01599

51300

2.25

hemE, UROD; uroporphyrinogen decarboxylase

Porphryin & chlorophyll metabolism

K00228

21674

2.17

CPOX, hemF; coproporphyrinogen III oxidase

Porphryin & chlorophyll metabolism

K00231

43719

1.87

PPOX, hemY; oxygen-dependent protoporphyrinogen oxidase

Porphryin & chlorophyll metabolism

K01772

15887

1.95

hemH, FECH; ferrochelatase

Porphryin & chlorophyll metabolism

K01772

18091

0.18

hemH, FECH; ferrochelatase

Porphryin & chlorophyll metabolism

K01772

19087

−0.72

hemH, FECH; ferrochelatase

Porphryin & chlorophyll metabolism

K02257

21293

0.08

COX10; protoheme IX farnesyltransferase

Porphryin & chlorophyll metabolism

K02259

1501

1.36

COX15; cytochrome c oxidase assembly protein subunit 15

Porphryin & chlorophyll metabolism

K03403

43039

3.56

chlH, bchH; magnesium chelatase subunit H

Porphryin & chlorophyll metabolism

K03403

15250

1.06

chlH, bchH; magnesium chelatase subunit H

Porphryin & chlorophyll metabolism

K03404

17580

2.21

chlD, bchD; magnesium chelatase subunit D

Porphryin & chlorophyll metabolism

K03428

10622

1.92

E2.1.1.11, chlM, bchM; magnesium-protoporphyrin O-methyltransferase

Porphryin & chlorophyll metabolism

K00218

28240

0.38

E1.3.1.33, por; protochlorophyllide reductase

Porphryin & chlorophyll metabolism

K00218

45156

0.42

E1.3.1.33, por; protochlorophyllide reductase

Porphryin & chlorophyll metabolism

K04040

21874

1.16

chlG, bchG; chlorophyll synthase

Porphryin & chlorophyll metabolism

K13606

65256

2.55

NOL, NYC1; chlorophyll(ide) b reductase

Porphryin & chlorophyll metabolism

K10960

19661

1.82

chlP, bchP; geranylgeranyl reductase

Porphryin & chlorophyll metabolism

K00510

28325

1.76

HMOX, hmuO, ho; heme oxygenase

Porphryin & chlorophyll metabolism

K00510

67894

2.01

HMOX, hmuO, ho; heme oxygenase

Porphryin & chlorophyll metabolism

K05370

8686

0.38

pebB; phycoerythrobilin:ferredoxin oxidoreductase

Porphryin & chlorophyll metabolism

K01764

44227

1.23

E4.4.1.17; cytochrome c heme-lyase

Porphryin & chlorophyll metabolism

K02291

46495

0.71

crtB; phytoene synthase

Carotenoid biosynthesis

K02291

41294

2.26

crtB; phytoene synthase

Carotenoid biosynthesis

K02293

16608

0.89

PDS, crtP; 15-cis-phytoene desaturase

Carotenoid biosynthesis

K02293

9496

2.23

PDS, crtP; 15-cis-phytoene desaturase

Carotenoid biosynthesis

K06443

39499

3.11

lcyB, crtL1, crtY; lycopene beta-cyclase

Carotenoid biosynthesis

K14606

6096

1.86

cruP; lycopene cyclase CruP

Carotenoid biosynthesis

K09837

28908

−3.68

LUT1, CYP97C1; carotene epsilon-monooxygenase

Carotenoid biosynthesis

K09838

40045

2.58

ZEP, ABA1; zeaxanthin epoxidase

Carotenoid biosynthesis

  1. KO, KEGG orthology number assigned to each protein; KN id, MMETSP identification number for kleptokaryon proteins