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Table 2 Identified cDNA from MEP, carotenoid and bixin pathways

From: De novo transcriptome sequencing in Bixa orellana to identify genes involved in methylerythritol phosphate, carotenoid and bixin biosynthesis

Description

Jako Hits

GenBank Accession no.

BoDXS1 (1-Deoxy-D-xylulose-5-phosphate synthase)

0

KT358983

BoDXS2a

2

KT358984

BoDXS2b

0

KT358985

BoDXS3

0

KT358986

BoDXR (1-Deoxy-D-xylulose-5-phosphate reductoisomerase)

2

KT358987

BoMCT (2-C-Methyl-D-erythritol 4-phosphate cytidyltransferase)

0

KT358988

BoCMK ( 4-Diphosphocytidyl-2-C-methyl-D-erythritol kinase)

1

KT358989

BoMDS (2-C-Methyl-D-erythritol 2,4-cyclodiphosphate synthase)

0

KT358990

BoHDS 4-Hydroxy-3-methylbut-2-en-1-yl diphosphate synthase)

3

KT358991

BoHDR (4-Hydroxy-3-methylbut-2-enyl diphosphate reductase)

1

KT358992

BoIDI (Isopentenyl diphosphate isomerase)

0

KT358993

BoGGDS (Geranylgeranyl diphosphate synthase)

4

KT358994

BoPSY1 (Phytoene synthase)

1

KT358995

BoPSY2

1

KT358996

BoPDS1 (Phytoene desaturase)

9

KT358997

BoPDS2a

0

KT358998

BoZ-ISO (15-cis-ζ-carotene isomerase)

0

KT358999

BoZDS (ζ-carotene desaturase)

8

KT359000

BoCRTISO1a (Carotene cis-trans isomerase)

0

KT359001

BoCRTISO1b

0

KT359002

BoCRTIOS2

0

KT359003

Boβ-LYC1 (Lycopene β-cyclase)

0

KT359004

Boβ-LYC2

0

KT359005

Boε-LYCa (Lycopene ε-cyclase)

0

KT359006

BoβCH1 (β-carotene hydroxylase)

0

KT359007

BoCYP97A3 (Cytochrome P450-type monooxygenase 97A3)

0

KT359008

BoCYP97C1 (Cytochrome P450-type monooxygenase 97C1)

0

KT359009

BoCYP97B3a (Cytochrome P450-type monooxygenase 97B3)

0

KT359010

BoZEP1 (Zeaxanthin epoxidase)

0

KT359011

BoZEP2

0

KT359013

BoVDE1 (Violaxanthin de-epoxidase)

0

KT359014

BoVDE2a

0

KT359015

BoNSY (Neoxanthin synthase)

0

KT359016

BoCCD1-1 (Carotene cleavage dioxygenase 1-Copy1)

0

KT359018

BoCCD1-2

0

KT359019

BoCCD1-3

0

KT359020

BoCCD1-4a

0

KT359021

BoCCD4-1 (Carotene cleavage dioxygenase 4-Copy1)

0

KT359022

BoCCD4-2

9

KT359023

BoCCD4-3

16

KT359024

BoCCD4-4

0

KT359025

BoCCD4-5a

0

KT359026

BoALDH2B4 (aldehyde dehydrogenase 2B4)

0

KT359027

BoALDH2B7-1

0

KT359028

BoALDH2B7-2

0

KT359029

BoALDH2C4a

0

KT359030

BoALDH3F1

0

KT359031

BoALDH3F2

0

KT359032

BoALDH3H1-1

10

KT359033

BoALDH3H1-2

0

KT359035

BoALDH3I1

2

KT359036

BoALDH5F1

0

KT359038

BoALDH6B2-1

0

KT359039

BoALDH6B2-2

0

KT359040

BoALDH6B3

0

KT359041

BoALDH7B4

1

KT359042

BoALDH10A8

0

KT359043

BoALDH11A3

0

KT359044

BoALDH12A1

0

KT359045

BoALDH18B1-1

0

KT359046

BoALDH18B1-2

0

KT359047

BoALDH22A1

0

KT359048

BoSABATH1 (SABATH family Methyltransferase1)

0

KT359049

BoSABATH2

0

KT359050

BoSABATH3

3

KT359051

BoSABATH4

6

KT359052

BoSABATH5

0

KT359053

BoSABATH6

0

KT359054

BoSABATH7

0

KT359055

BoSABATH8

0

KT359056

BoSABATH9

0

KT359057

BoSABATH10a

0

KT359058

BoSABATH11

0

KT359059

BoSABATH12

0

KT359060

  1. aPartial sequence