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Table 2 Identified cDNA from MEP, carotenoid and bixin pathways

From: De novo transcriptome sequencing in Bixa orellana to identify genes involved in methylerythritol phosphate, carotenoid and bixin biosynthesis

Description Jako Hits GenBank Accession no.
BoDXS1 (1-Deoxy-D-xylulose-5-phosphate synthase) 0 KT358983
BoDXS2a 2 KT358984
BoDXS2b 0 KT358985
BoDXS3 0 KT358986
BoDXR (1-Deoxy-D-xylulose-5-phosphate reductoisomerase) 2 KT358987
BoMCT (2-C-Methyl-D-erythritol 4-phosphate cytidyltransferase) 0 KT358988
BoCMK ( 4-Diphosphocytidyl-2-C-methyl-D-erythritol kinase) 1 KT358989
BoMDS (2-C-Methyl-D-erythritol 2,4-cyclodiphosphate synthase) 0 KT358990
BoHDS 4-Hydroxy-3-methylbut-2-en-1-yl diphosphate synthase) 3 KT358991
BoHDR (4-Hydroxy-3-methylbut-2-enyl diphosphate reductase) 1 KT358992
BoIDI (Isopentenyl diphosphate isomerase) 0 KT358993
BoGGDS (Geranylgeranyl diphosphate synthase) 4 KT358994
BoPSY1 (Phytoene synthase) 1 KT358995
BoPSY2 1 KT358996
BoPDS1 (Phytoene desaturase) 9 KT358997
BoPDS2a 0 KT358998
BoZ-ISO (15-cis-ζ-carotene isomerase) 0 KT358999
BoZDS (ζ-carotene desaturase) 8 KT359000
BoCRTISO1a (Carotene cis-trans isomerase) 0 KT359001
BoCRTISO1b 0 KT359002
BoCRTIOS2 0 KT359003
Boβ-LYC1 (Lycopene β-cyclase) 0 KT359004
Boβ-LYC2 0 KT359005
Boε-LYCa (Lycopene ε-cyclase) 0 KT359006
BoβCH1 (β-carotene hydroxylase) 0 KT359007
BoCYP97A3 (Cytochrome P450-type monooxygenase 97A3) 0 KT359008
BoCYP97C1 (Cytochrome P450-type monooxygenase 97C1) 0 KT359009
BoCYP97B3a (Cytochrome P450-type monooxygenase 97B3) 0 KT359010
BoZEP1 (Zeaxanthin epoxidase) 0 KT359011
BoZEP2 0 KT359013
BoVDE1 (Violaxanthin de-epoxidase) 0 KT359014
BoVDE2a 0 KT359015
BoNSY (Neoxanthin synthase) 0 KT359016
BoCCD1-1 (Carotene cleavage dioxygenase 1-Copy1) 0 KT359018
BoCCD1-2 0 KT359019
BoCCD1-3 0 KT359020
BoCCD1-4a 0 KT359021
BoCCD4-1 (Carotene cleavage dioxygenase 4-Copy1) 0 KT359022
BoCCD4-2 9 KT359023
BoCCD4-3 16 KT359024
BoCCD4-4 0 KT359025
BoCCD4-5a 0 KT359026
BoALDH2B4 (aldehyde dehydrogenase 2B4) 0 KT359027
BoALDH2B7-1 0 KT359028
BoALDH2B7-2 0 KT359029
BoALDH2C4a 0 KT359030
BoALDH3F1 0 KT359031
BoALDH3F2 0 KT359032
BoALDH3H1-1 10 KT359033
BoALDH3H1-2 0 KT359035
BoALDH3I1 2 KT359036
BoALDH5F1 0 KT359038
BoALDH6B2-1 0 KT359039
BoALDH6B2-2 0 KT359040
BoALDH6B3 0 KT359041
BoALDH7B4 1 KT359042
BoALDH10A8 0 KT359043
BoALDH11A3 0 KT359044
BoALDH12A1 0 KT359045
BoALDH18B1-1 0 KT359046
BoALDH18B1-2 0 KT359047
BoALDH22A1 0 KT359048
BoSABATH1 (SABATH family Methyltransferase1) 0 KT359049
BoSABATH2 0 KT359050
BoSABATH3 3 KT359051
BoSABATH4 6 KT359052
BoSABATH5 0 KT359053
BoSABATH6 0 KT359054
BoSABATH7 0 KT359055
BoSABATH8 0 KT359056
BoSABATH9 0 KT359057
BoSABATH10a 0 KT359058
BoSABATH11 0 KT359059
BoSABATH12 0 KT359060
  1. aPartial sequence