Skip to main content

Table 4 Genomic characteristics of select P. aeruginosa strains

From: Genotypic and phenotypic analyses of a Pseudomonas aeruginosa chronic bronchiectasis isolate reveal differences from cystic fibrosis and laboratory strains

Strain

PAHM4

PAO1

PA14

PA2192c

PA7

LESB58

NCGM2.S1

C3719c

Size (bp)

6,381,186

6,264,403

6,524,142

6,905,121

6,588,339

6,601,757

6,764,661

6,222,097

% G + C

66.2

66.6

66.3

66.2

66.5

66.5

66.1

66.5

# ORFs

5906

5686

5584

6191

6071

6113

6287

5578

Average ORF size

938

997

1022

949

954

958

956

943

Coding %

87.4

90.4

87.4

85.7

87.9

88.7

88.9

87.4

rRNA

12

13b

13a,b

4

12

12

12

4

tRNA

55

63

59a

46

65

68

66

40

  1. aValues from pseudomonas.com [147]
  2. bincludes annotated 6S rRNA
  3. cValues from Mathee et al. [169]