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Table 7 CUP cluster composition of P. aeruginosa strains

From: Genotypic and phenotypic analyses of a Pseudomonas aeruginosa chronic bronchiectasis isolate reveal differences from cystic fibrosis and laboratory strains

CUP cluster PAHM4 PA7 PA14 NCGM2.S1 PA2192 PAO1 LESB58 C3719 M18
A absent absent present present present present present present present
Ba PAHM4 PA7 PAO1 PAO1 PAO1 PAO1 PAO1 PAO1 PAO1
Ca PAHM4 PA7 PAO1 PAO1 PAO1 PAO1 PAO1 PAO1 PAO1
Db absent PAPI-1 PAPI-1 absent absent absent absent absent absent
E present present present present present present present present present
Other clustera,c absent absent absent Absent PA2192 PAO1 PAO1 PAO1 PAO1
  1. astrain name indicates presence of a strain-specific allele
  2. bCUP cluster D is associated with PAPI-1 island
  3. cThe unnamed cluster is described by Filloux [170]
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BMC Genomics

ISSN: 1471-2164

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