BMC Genomics

Table 7 CUP cluster composition of P. aeruginosa strains

From: Genotypic and phenotypic analyses of a Pseudomonas aeruginosa chronic bronchiectasis isolate reveal differences from cystic fibrosis and laboratory strains

CUP cluster	PAHM4	PA7	PA14	NCGM2.S1	PA2192	PAO1	LESB58	C3719	M18
A	absent	absent	present	present	present	present	present	present	present
B^a	PAHM4	PA7	PAO1	PAO1	PAO1	PAO1	PAO1	PAO1	PAO1
C^a	PAHM4	PA7	PAO1	PAO1	PAO1	PAO1	PAO1	PAO1	PAO1
D^b	absent	PAPI-1	PAPI-1	absent	absent	absent	absent	absent	absent
E	present	present	present	present	present	present	present	present	present
Other cluster^a,c	absent	absent	absent	Absent	PA2192	PAO1	PAO1	PAO1	PAO1

^astrain name indicates presence of a strain-specific allele
^bCUP cluster D is associated with PAPI-1 island
^cThe unnamed cluster is described by Filloux [170]

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ISSN: 1471-2164

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