Table 4 Zebrafish and mouse predicted enhancers subjected to experimental validation
From: Functionally conserved enhancers with divergent sequences in distant vertebrates
ECR | Zebrafish (Zv9 July 2010) | Mouse (mm9) July 2007) | ||
|---|---|---|---|---|
Expression | Coordinates | Expression | Coordinates | |
1 | Spinal cord (48) | chr6:20,797,116-20,798,106 | negative | chr5:107,545,775–107,546,750 |
2 | Epidermis (24,48) | chr6:43,538,446–43,539,094 | negative | chr6:98,881,656–98,882,625 |
negative | chr6:98,883,956–98,884,889 | |||
3 | Tail bud (24), eye (48), heart (48) | chr9:11,657,708–11,658,704 | not tested |  |
4 | Notochord (24,48) | chr19:22,713,465–22,714,026 | negative | chr18:80,876,694–80,877,675 |
negative | chr18:80,876,778–80,877,739 | |||
5 | Epidermis (24,48) | chr19:41,272,614–41,273,241 | not tested |  |
6 | Epidermis (24,48), Otic Vesicle (24,48), Somitic muscle (24,48) | chr2:39,790,777–39,791,782 | Epidermis (24,48), Notochord (24), Olfactory epithelium (24,48), Spinal cord (24), Otic Vesicle (48), Pectoral fin (48) | chr1:77,387,974–77,389,004 |
7 | Hindbrain (24,48), Olfactory epithelium (24,48) | chr2:39,792,312–39,793,241 | Eye (24,48), Olfactory bulb (24,48), Hindbrain (24,48) | chr1:77,390,034–77,391,031 |
8 | Somitic muscle (24,48), Olfactory epithelium (48), Hindbrain (48) | chr2:39,837,096–39,838,009 | negative | chr1:77,503,689–77,504,676 |
negative | chr1:77,506,344–77,507,445 | |||
9 | Spinal cord (24,48) | chr4:16,470,975–16,471,819 | Midbrain (24), Yolk (24) | chr10:87,004,979–87,005,964 |
Somitic Muscle (24,48), Skin under yolk (24,48), Phar. Arches (48), Pectoral fin (48) | chr10:87,008,830–87,009,792 | |||
10 | Somitic muscle (24,48), Olfactory epithelium (48) | chr9:22,365,926–22,366,799 | Somitic Muscle (24,48), Pericardium (24,48) | chr14:58,234,894–58,235,874 |
11 | Hindbrain (24), Somitic muscle (24,48), Heart (48) | chr9:22,368,460–22,369,405 | ||
12 | Epidermis (24,48), Otic vesicle (24,48), Yolk (24,48) | chr14:41,645,428–41,646,386 | Epidermis (24), Olfactory epithelium (24) | chrX:130,162,955–130,163,923 |
13 | Hindbrain (24), Olfactory epithelium (24,48), Line under eye (24,48), Spinal cord (48) | chr20:21,970,078–21,970,911 | Spinal cord (24) | chr12:72,999,373–73,000,279 |