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Table 3 Known miRNA families identified by similarity

From: MicroRNA and mRNA expression profiling analysis revealed the regulation of plant height in Gossypium hirsutum

Family RPM Log2
A1 A3 A9 A1–A9 A3–A9
miR156 1,157.81 278.61 1,038.36 0.16 −1.90
miR159 509,710.98 774,531.13 312,869.01 0.70 1.31
miR160 2,481.01 98.40 471.62 2.40 −2.26
miR162 2,081.68 169.15 499.36 2.06 −1.56
miR164 1,547.68 97.29 582.59 1.41 −2.58
miR166 404,503.62 214,922.06 654,186.53 −0.69 −1.61
miR167 6,261.59 208.96 820.38 2.93 −1.97
miR168 4,430.37 192.37 1,272.19 1.80 −2.73
miR169 18.90 5.53 0.01 10.88 9.11
miR171 5,106.15 498.62 1,803.26 1.50 −1.85
miR172 4,361.85 89.55 475.58 3.20 −2.41
miR2111 82.70 12.16 23.78 1.80 −0.97
miR2949 3,350.54 227.75 535.03 2.65 −1.23
miR2950 163.04 13.27 55.48 1.56 −2.06
miR319 330.02 733.11 541.29 −0.71 0.44
miR3630 134.68 49.75 317.06 −1.24 −2.67
miR390 5,198.30 313.98 1,894.41 1.46 −2.59
miR393 111.05 9.95 7.93 3.81 0.33
miR394 2,696.03 178.00 669.78 2.01 −1.91
miR395 340.25 138.20 233.83 0.54 −0.76
miR396 4,184.63 97.29 550.89 2.93 −2.50
miR399 6,025.31 371.48 1,042.32 2.53 −1.49
miR403 311.90 13.27 39.63 2.98 −1.58
miR408 11.81 125.93 41.61 −1.82 1.60
miR477 106.33 0.01 11.89 3.16 −10.22
miR482 23,931.10 3,301.27 9,313.53 1.36 −1.50
miR530 141.77 2.21 27.74 2.35 −3.65
miR535 510.38 186.84 772.83 −0.60 −2.05
miR827 5,647.25 1,003.87 2,853.51 0.98 −1.51
miR828 37.81 0.01 0.01 11.88 0.00
miR858 2.36 2.21 0.01 7.88 7.79
NA 5,021.09 2,127.81 7,048.56 −0.49 −1.73
  1. RPM: Reads per million, 0 in A1, A3 or A9 was nomorlized as 0.01 to facilitate calculation; NA, unknown miRNA family