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Table 3 Known miRNA families identified by similarity

From: MicroRNA and mRNA expression profiling analysis revealed the regulation of plant height in Gossypium hirsutum

Family

RPM

Log2

A1

A3

A9

A1–A9

A3–A9

miR156

1,157.81

278.61

1,038.36

0.16

−1.90

miR159

509,710.98

774,531.13

312,869.01

0.70

1.31

miR160

2,481.01

98.40

471.62

2.40

−2.26

miR162

2,081.68

169.15

499.36

2.06

−1.56

miR164

1,547.68

97.29

582.59

1.41

−2.58

miR166

404,503.62

214,922.06

654,186.53

−0.69

−1.61

miR167

6,261.59

208.96

820.38

2.93

−1.97

miR168

4,430.37

192.37

1,272.19

1.80

−2.73

miR169

18.90

5.53

0.01

10.88

9.11

miR171

5,106.15

498.62

1,803.26

1.50

−1.85

miR172

4,361.85

89.55

475.58

3.20

−2.41

miR2111

82.70

12.16

23.78

1.80

−0.97

miR2949

3,350.54

227.75

535.03

2.65

−1.23

miR2950

163.04

13.27

55.48

1.56

−2.06

miR319

330.02

733.11

541.29

−0.71

0.44

miR3630

134.68

49.75

317.06

−1.24

−2.67

miR390

5,198.30

313.98

1,894.41

1.46

−2.59

miR393

111.05

9.95

7.93

3.81

0.33

miR394

2,696.03

178.00

669.78

2.01

−1.91

miR395

340.25

138.20

233.83

0.54

−0.76

miR396

4,184.63

97.29

550.89

2.93

−2.50

miR399

6,025.31

371.48

1,042.32

2.53

−1.49

miR403

311.90

13.27

39.63

2.98

−1.58

miR408

11.81

125.93

41.61

−1.82

1.60

miR477

106.33

0.01

11.89

3.16

−10.22

miR482

23,931.10

3,301.27

9,313.53

1.36

−1.50

miR530

141.77

2.21

27.74

2.35

−3.65

miR535

510.38

186.84

772.83

−0.60

−2.05

miR827

5,647.25

1,003.87

2,853.51

0.98

−1.51

miR828

37.81

0.01

0.01

11.88

0.00

miR858

2.36

2.21

0.01

7.88

7.79

NA

5,021.09

2,127.81

7,048.56

−0.49

−1.73

  1. RPM: Reads per million, 0 in A1, A3 or A9 was nomorlized as 0.01 to facilitate calculation; NA, unknown miRNA family