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Table 3 Line-specific CNVRs on GGA16

From: Genome-wide identification of copy number variations between two chicken lines that differ in genetic resistance to Marek’s disease

CNVR ID Start End Size (bp) Status Line Sample Overlap CNVs Overlap genes
CNVR4435 107501 108600 1100 Loss 72 SUS1 NA ENSGALT00000000188
CNVR4437 161801 163800 2000 Loss 72 SUS1 NA ENSGALT00000044422;
ENSGALT00000045456;
ENSGALT00000045935;
ENSGALT00000042650
CNVR4438 171001 172600 1600 Loss 72 SUS1 NA NA
CNVR4439 177101 179200 2100 Loss 72 SUS1;SUS2 NA ENSGALT00000000149
CNVR4441 186601 189200 2600 Loss 63 RES1 NA ENSGALT00000000149
CNVR4444 235134 251820 16687 Loss 72 SUS1 Crooijmans et al. [30] ENSGALT00000003794;
ENSGALT00000043371
CNVR4447 402401 405200 2800 Loss 72 SUS3 Crooijmans et al. [30]; Luo et al. [31] ENSGALT00000001702
CNVR4448 408901 412800 3900 Gain 63 RES1 Crooijmans et al. [30]; Luo et al. [31] ENSGALT00000041340