Table 2 Statistics of the variants found in B. xylophilus strains

ALL

C14-5

OKD1-F7

S10-P3

S10-P9

T4

Genomic positions with variants

3,040,397

1,933,181

1,859,643

945,217

944,920

885,905

Genomic positions with SNPs

2,772,939

1,754,649

1,683,010

846,799

846,616

795,391

Homozygotic SNP ratio (%)

95.28

93.81

95.90

95.96

95.98

95.74

SNPs (transitions)

1,037,660

991,210

496,779

496,806

467,365

SNPs (transversions)

719,934

694,556

351,645

351,459

329,351

Ratio transitions/transversions

1.44

1.43

1.41

1.41

1.42