Skip to main content

Table 3 Genes in the un-mapped read assemblies that were different between S10-P3 and S10-P9

From: Genome-wide variation in the pinewood nematode Bursaphelenchus xylophilus and its relationship with pathogenic traits

Gene ID Blast tophit (organism) E-value Coverage (%) GO annotation Signal-P
Genes present in S10-P3 and absent in S10-P9
g53.t1_Ip1476* db module family protein 2.45E-33 65.7 F: transferase activity; F: transferase activity, transferring acyl groups other than amino-acyl groups; F: transferase activity, transferring acyl groups  
g126.t1_Ip1476* dna helicase 1.51E-06 50.4 F: helicase activity; C: chloroplast envelope; C: chloroplast; F: ATP binding; F: nucleotide binding; F: nucleoside-triphosphatase activity; F: nucleic acid binding; F:ATP-dependent 5’-3’ DNA helicase activity; C: plastid  
g80.t1_Ip1475 Integrase domain-containing protein 5.90E-17 59.45 F: binding  
Genes present in S10-P9 and absent in S10-P3
g5.t1_Ip1474 No hit     
g129.t1_Ip1474 Protein isoform a 4.33E-10 42.7 F: N-acetyltransferase activity; P: embryo development ending in birth or egg hatching  
g131.t1_Ip1475 Cysteine proteinase rd19a-like 8.24E-07 55.45 P: proteolysis; F: hydrolase activity; F: cysteine-type peptidase activity; F: peptidase activity SignalP-noTM (EUK)
g17.t1_Ip1477* Syntaxin and target snare coiled-coil region domain-containing protein 2.30E-42 59.15 P: transport; P: cell-cell signaling; P: biological process  
g27.t1_Ip1477 wd repeat-containing protein 5 3.98E-174 83.2 P: multicellular organismal development; F: transferase activity; C: nucleoplasm; C: protein complex;; P: regulation of biological process; P: cellular protein modification process; P: organelle organization; F: protein binding  
g29.t1_Ip1477 Transthyretin domain-containing protein 2.46E-32 61.95 C: integral to membrane; C: extracellular space SignalP-noTM (EUK)
g77.t1_Ip1477* No hit - - -  
g87.t1_Ip1477* No hit - - -  
g112.t1_Ip1477* No hit - - -  
  1. *: genes unique to the specified sample, -: no information available