Table 2 Comparative abundance of RRMs by Pfam class (including isoforms) across evolutionarily diverse species
From: A bioinformatic survey of RNA-binding proteins in Plasmodium
Species name | PF00076 (RRM_1) | PF14259 (RRM_6) | PF13893 (RRM_5) | PF10598 (RRM_4) | PF04059 (RRM_2) | PF05172 (Nup_35) | PF10567 (Nab6) | PF14605 (Nup35_RRM_2) | Total |
|---|---|---|---|---|---|---|---|---|---|
Homo sapiens | 812 | 163 | 120 | 1 | 0 | 4 | 0 | 0 | 1100 |
Arabidopsis thaliana | 505 | 105 | 51 | 3 | 15 | 2 | 0 | 7 | 688 |
Drosophila melanogaster | 289 | 49 | 47 | 2 | 0 | 1 | 0 | 0 | 388 |
Caenorhabditis elegans | 144 | 24 | 15 | 1 | 0 | 1 | 0 | 0 | 185 |
Saccharomyces cerevisiae | 42 | 9 | 10 | 1 | 1 | 4 | 1 | 4 | 72 |
Plasmodium falciparum | 55 | 10 | 8 | 1 | 1 | 0 | 0 | 0 | 75 |
Plasmodium vivax | 56 | 10 | 8 | 1 | 1 | 0 | 0 | 0 | 76 |
Plasmodium yoelii | 55 | 8 | 8 | 1 | 1 | 0 | 0 | 0 | 73 |
Toxoplasma gondii | 137 | 19 | 20 | 2 | 5 | 0 | 0 | 0 | 183 |
Cryptosporidium parvum | 30 | 4 | 7 | 1 | 0 | 0 | 0 | 0 | 42 |
Trypanosoma cruzi | 51 | 5 | 4 | 1 | 0 | 0 | 0 | 1 | 62 |