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Table 2 The Gene-Chip and ChIP-seq agreement

From: The epigenetic processes of meiosis in male mice are broadly affected by the widely used herbicide atrazine

Affymetrix ID Official gene name FC Gene Chip FC Chip-Seq Official gene symbol, full description
17550548 Acsm2 2.1 1.2 Acyl-coa synthetase medium-chain family member 2
17205319 Cox18 1.8 1.1 cytochrome c oxidase assembly protein 18
17200441 Dhrs1 1.7 1.1 Dehydrogenase/reductase (SDR family) member 1
17205257 Gbf1 1.6 1.2 Golgi-specific brefeldin A-resistance factor 1
17202563 MrpL27 1.5 1.2 Mitochondrial ribosomal protein L27
17205437 Arfgef1 1.6 1.2 ADP-ribosylation factor guanine nucleotide-exchange factor 1
17201149 Xpo7 1.5 1.4 Exportin 7; similar to Ran-binding protein 16
17308165 Entpd4 0.4 0.6 Ectonucleoside triphosphate diphosphohydrolase 4
17449641 G3bp2 1.5 1.2 Gtpase activating protein (SH3 domain) binding protein 2
17308149 Gm16677 0.6 0.6 Predicted gene 16677
17548436 Gm17019 2.1 3.7 Predicted gene 17019
17203369 Sar1a 1.6 1.1 SAR1 gene homolog A (S. Cerevisiae)
17515315 Ldlr 0.7 0.8 Low density lipoprotein receptor
17500195 Star 0.6 0.7 Steroidogenic acute regulatory protein
17201763 Nmt1 1.6 1.1 N-myristoyltransferase 1
17203277 Psma1 1.5 1.1 Proteasome (prosome, macropain) subunit, alpha type 1
17453132 Psph 0.6 0.9 Phosphoserine phosphatase
17323063 Rrn3 1.6 1.1 RRN3 RNA polymerase I transcription factor homolog (yeast)
17445634 Gm9758 1.8 3.1 Spermatogenesis associated glutamate (E)-rich protein 4e
17446524 Speer4b 1.6 1.4 Spermatogenesis associated glutamate (E)-rich protein 4b
17445689 Speer4c 1.5 1.5 Spermatogenesis associated glutamate (E)-rich protein 4e
17445673 Speer4e 2 6 Spermatogenesis associated glutamate (E)-rich protein 4e
17434884 Speer7-ps1 2.1 6.2 Spermatogenesis associated glutamate (E)-rich protein 7, pseudogene 1
17434864 Speer8-ps1 1.8 2.4 Spermatogenesis associated glutamate (E)-rich protein 8, pseudogene 1
17529481 Tbx18 0.6 0.8 T-box18
17201539 Kif18b 1.6 1.1 Kinesin family member 18B
17401007 Trim45 1.9 2.4 Tripartite motif-containing 45
17535269 1700020N15Rik 0.6 1.2 RIKEN cdna 1700020 N15 gene
17201329 Ccdc103 0.6 1.2 Coiled-coil domain containing 103
17207313 Cpsf7 0.7 1.2 Cleavage and polyadenylation specific factor 7
17201293 Eftud2 0.6 1.2 Elongation factor Tu GTP binding domain containing 2
17206471 Eif5 0.6 1.2 Similar to Eukaryotic translation initiation factor 5
17448749 Fryl 0.6 1.2 Furry homolog-like (Drosophila)
17208347 Hdac5 1.5 1 Histone deacetylase 5
17538773 Huwe1 0.6 1 HECT, UBA and WWE domain containing 1
17546762 Mid1 0.6 1.5 Similar to midline 1
17207105 Pkd1 0.7 1 Polycystic kidney disease 1 homolog
17202313 Psap 1.7 1 Prosaposin
17204631 Smim7 1.8 0.9 Small integral membrane protein 7
17438319 Tmem165 0.6 1.1 Transmembrane protein 165
17392600 9230104L09Rik 0.5 ND RIKEN cdna 9230104 L09 gene
17290163 Ccl28 1.6 ND Chemokine (C-C motif) ligand 28
17413061 Gm5859 0.5 ND Similar to 4933409K07Rik protein
17477347 Klk1b22 1.8 ND Kallikrein 1-related peptidase b22
17233226 Lilrb4 0.6 ND Glycoprotein 49 A; leukocyte immunoglobulin-like receptor, subfamily B, member 4
17532649 Nd6 2.3 ND NADH dehydrogenase subunit 6