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Table 2 Differentially expressed genes (5 % FDR) in severe vs mild disease as characterized both by a decline in % predicted DLCO and FVC

From: Relationship between gene expression and lung function in Idiopathic Interstitial Pneumonias

Transcript ID

Gene symbol

p-value (Severe vs Mild DLCO)

Severe/Mild Fold Change (DLCO)

p-value (Severe vs Mild FVC)

Severe/Mild Fold Change (FVC)

7922229

SELE

9.4E-05

2.87

2.9E-05

2.80

7921821

ADAMTS4

5.0E-05

2.22

2.8E-06

2.41

8146957

PI15

1.9E-05

2.04

1.7E-06

2.16

8043981

IL1R2

0.00035

1.86

2.5E-05

2.00

7976496

SERPINA3

9.5E-06

1.81

3.3E-05

1.76

8088560

ADAMTS9

1.4E-05

1.84

8.5E-05

1.75

8162276

NFIL3

0.00011

1.59

6.9E-06

1.63

7974851

HIF1A

6.8E-07

1.52

2.7E-07

1.57

8145122

SLC39A14

0.00012

1.51

1.9E-05

1.51

8113220

ELL2

8.2E-06

1.52

2.6E-05

1.51

8106743

VCAN

8.3E-05

1.48

0.00014

1.49

7921344

ELL2

1.6E-05

1.56

3.0E-05

1.49

7902227

GADD45A

2.6E-05

1.33

6.4E-08

1.48

8059376

SERPINE2

0.00031

1.57

0.00013

1.45

8043909

NPAS2

5.2E-05

1.56

0.00067

1.45

7897449

SPSB1

0.00011

1.36

4.3E-06

1.44

8044391

MERTK

0.00015

1.46

1.5E-05

1.43

8168749

SRPX2

1.9E-06

1.57

3.0E-05

1.43

8156043

PSAT1

0.00017

1.40

9.0E-06

1.43

8115814

SH3PXD2B

3.0E-05

1.47

3.0E-05

1.42

8106098

MAP1B

3.4E-05

1.48

0.00019

1.42

8157216

UGCG

3.8E-05

1.39

5.3E-06

1.41

8099685

LGI2

0.00032

1.45

0.00018

1.40

8007931

ITGB3

4.4E-05

1.37

5.2E-05

1.40

7986446

ALDH1A3

3.1E-05

1.49

0.0020

1.37

8105040

OSMR

0.00012

1.33

3.00E-05

1.35

8043995

IL1R1

3.4E-05

1.34

3.8E-05

1.35

7922610

ABL2

0.00034

1.39

3.8E-05

1.33

7915787

PIK3R3

2.9E-05

1.26

4.9E-05

1.33

8006123

CPD

0.00017

1.24

3.2E-05

1.27

8066939

B4GALT5

0.00026

1.25

3.2E-05

1.27

8133155

TPST1

0.00021

1.32

1.1E-05

1.25

8041168

SNORD53

0.00019

1.30

0.0018

1.25

8102482

SEC24D

1.0E-05

1.31

5.5E-05

1.24

8041149

WDR43

0.00010

1.29

0.00079

1.24

7985934

SEMA4B

0.00012

1.21

8.8E-05

1.23

8076515

ARFGAP3

0.00013

1.26

0.00035

1.21

8117128

E2F3

3.5E-06

1.27

0.00022

1.20

7966839

VSIG10

0.00021

−1.17

0.0026

−1.15

8109086

ADRB2

0.00015

−1.24

0.0013

−1.17

8035201

CPAMD8

5.5E-05

−1.30

0.0010

−1.22

8041206

LBH

0.00036

−1.33

0.0015

−1.26

7940530

C11orf9

3.2E-05

−1.24

0.0019

−1.27

8149885

ADRA1A

1.7E-05

−1.33

4.1E-05

−1.27

8082465

CCDC48

9.8E-05

−1.28

8.1E-06

−1.28

8038117

DBP

0.00019

−1.35

0.00016

−1.31

8057677

SLC40A1

0.00038

−1.41

0.0023

−1.32

7968650

C13orf36

7.1E-06

−1.38

0.00019

−1.34

8089467

ZBED2

3.5E-05

−1.45

0.00021

−1.45

8171248

KAL1

5.3E-05

−1.67

0.00077

−1.50

8155734

FAM189A2

2.0E-05

−1.56

4.0E-05

−1.54

8156569

MIR23B

0.00024

−1.71

3.0E-06

−1.66

8179967

AGER

6.22E-05

−1.81

0.0023

−1.74

8125341

AGER

7.5E-05

−1.42

0.0026

−1.77

8178771

AGER

7.1E-05

−1.67

0.0025

−1.78

8109383

GRIA1

4.9E-06

−1.86

3.4E-05

−1.81

8171427

FIGF

0.00028

−2.07

0.0011

−1.90

7933855

RTKN2

0.00020

−2.57

0.0016

−2.34