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Table 3 Summary of annotation data of unique variations containing SNPs and indels

From: Variation detection based on next-generation sequencing of type Chinese 1 strains of Toxoplasma gondii with different virulence from China

Summary of annotation data of unique variations of SNPs and indels

 

Downstream

Exonic

Intergenic

Intronic

Splicing

Upstream

Upstream; downstream

5’UTR

Total

Wh3-SNPs

2300

4529

6445

9049

9

2013

127

1

24473

Wh6-SNPs

2312

4405

5936

9500

1

1951

154

3

24262

Wh3-indels

530

345

600

2877

4

418

24

0

4798

Wh6- indels

599

297

616

3462

6

434

38

0

5452