Microarray probe IDb | Protein name (species affiliation, GenBank accession number, and associated E-value for the best named BLASTx hit)c | Functional annotation associated with best named BLASTx hitd | Microarray fold change in RA-Zoo versus: | QPCR fold change in RA-Zoo versuse: | ||
---|---|---|---|---|---|---|
RA | RA-PH | RA | RA-PH | |||
37395 | Glutathione peroxidase 1b (Sparus aurata, AFY97791, 1.81E-101) | Response to oxidative stress (BP); oxidation-reduction process (BP); peroxidase activity (MF); glutathione peroxidase activity (MF); oxidoreductase activity (MF). | 2.57 | 2.68 | 2.66 | 3.33 |
42046 | Selenoprotein Pa (Oncorhynchus mykiss, CCX35038, 1.97E-54) | NA | 3.31 | 3.89 | 4.10 | 5.34 |
42811 | Trypsinogen H1_3a1 (Dissostichus mawsoni, AEA08590, 2.07E-120) | Proteolysis (BP); catalytic activity (MF); serine-type endopeptidase activity (MF); hydrolase activity (MF). | 5.62 | 3.40 | 3.28 | 1.88 |
42084 | Aurora kinase B (Danio rerio, NP_997731, 2.47E-33) | ATP binding (MF); histone serine kinase activity (MF); metal ion binding (MF); cellular response to UV (BP); chromosome segregation (BP); mitotic cytokinesis (BP); spindle midzone assembly involved in mitosis (BP); multicellular organismal development (BP); negative regulation of B cell apoptotic process (BP); histone H3-S28 phosphorylation (BP); transferase activity (MF)f. | 1.79 | 1.59 | 1.51 | 1.54 |
46230 | Nattectin precursor (Anoplopoma fimbria, ACQ58341, 7.10E-31) | Carbohydrate binding (MF). | 2.04 | 2.13 | 2.45 | 2.58 |
36829 | Dehydrogenase/reductase SDR family member 1 (Salmo salar, NP_001134326; 1.87E-59) | Metabolic process (BP); oxidation-reduction process (BP); oxidoreductase activity (MF). | −1.60 | −2.29 | −2.58 | −1.96 |
37900 | Cytochrome P450 CYP2Y3 (Danio rerio, AAX37329, 6.47E-90)g | Oxidation-reduction process (BP); monooxygenase activity (MF); iron ion binding (MF); oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen (MF); heme binding (MF). | −3.14 | −2.61 | −6.94 | −4.99 |
38166 | Microsomal glutathione S-transferase 3 (Oncorhynchus mykiss, ACO07847, 1.25E-73) | Metabolic process (BP); transferase activity (MF). | −1.88 | −1.99 | −2.45 | −1.79 |
39283 | Peroxiredoxin-1 (alias Natural killer enhancing factor) (Anoplopoma fimbria, ACQ58049, 3.73E-125) | Oxidation-reduction process (BP); antioxidant activity (MF); oxidoreductase activity (MF); peroxiredoxin activity (MF). | −2.05 | −2.51 | −2.99 | −2.89 |
41986 | DNA-damage-inducible transcript 4 protein (alias REDD1; RTP801) (Dicentrarchus labrax, CBN81525, 9.89E-88) | Negative regulation of signal transduction (BP). | −3.06 | −1.89 | −3.88 | −2.26 |
42481 | Solute carrier family 6, member 6 (alias Sodium- and chloride-dependent taurine transporter) (Salmo salar, NP_001117102, 1.53E-104) | Transport (BP); neurotransmitter transport (BP); organic acid transport (BP); transmembrane transport (BP); neurotransmitter:sodium symporter activity (MF); taurine:sodium symporter activity (MF). | −1.84 | −1.77 | −2.37 | −2.33 |
42540 | Thioredoxin-interacting protein (Salmo salar, ACN10667, 1.80E-92) | NA | −2.02 | −2.10 | −2.29 | −2.38 |
37201 | Ferritin, middle subunit (Salmo salar, ACI66864, 2.69E-12) | Iron ion transport (BP); cellular iron ion homeostasis (BP); ferric iron binding (MF). | −2.25 | −1.86 | −2.61 | −2.95 |
36536 | Coagulation factor V (Danio rerio, AAN71005, 9.03E-15) | Cell adhesion (BP); copper ion binding (MF). | −1.98 | −2.04 | −2.15 | −2.30 |