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Table 1 Characteristics of exome sequences analysed

From: Determining multiallelic complex copy number and sequence variation from high coverage exome sequencing data

Centre name Samples Samples with > 50 reads per exon Sample with a copy number call Samples with a copy number call P > 0.95* Sequence enrichment method
BCM 228 228 147 129 (88 %) HSGC VCRome custom array
BGI 894 866 866 795 (91 %) NimbleGen SeqCap_EZ_Exome v2
BI 830 161 161 140 (87 %) Agilent SureSelect_All_Exon_V2
WUGSC 503 397 288 221 (76 %) NimbleGen SeqCap_EZ_Exome v3
  1. *posterior probability of the copy number call is >0.95
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