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Table 3 Discrepant copy number calls between exome sequence read depth (SRD) analysis and previous analyses

From: Determining multiallelic complex copy number and sequence variation from high coverage exome sequencing data

Sample Pop Batch Posterior probability of Exome SRD call Copy number from Exome SRD PRT and nanostring copy number Copy number from whole genome SRD
NA18858 YRI BGI 0.589 6 8 8
NA18861 YRI BGI 0.996 5 6 6
NA11892 CEU BGI 0.968 3 5 3
NA11893 CEU BGI 0.977 4 5 5
NA12156 CEU BCM 0.610 5 6 na
NA18912 YRI BI 0.982 6 5 6
NA12761 CEU WUGSC 0.995 4 3 na