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Table 1 Gene distribution of FUS, EWS and Ac-H3K9 ChIP-seq peaks in a gene based model

From: EWS and FUS bind a subset of transcribed genes encoding proteins enriched in RNA regulatory functions

Protein

All

Exon

Intron

Exon + Intron

Upstream

Downstream

Upstream + Downstream

FUS

134

9

17

1

21

86

0

EWS

241

11

52

2

47

129

0

Ac-H3K9

15115

2510

5911

804

3073

2164

653

  1. Gene distributions were subdivided into six groups: exon, intron, exon + intron (exon is intron sequence in another gene), upstream (10 kb distance), downstream (10 kb distance), and upstream + downstream. The latter specifies a chromosomal localization in where a peak is until 10 kb upstream for one gene but at the same time downstream of a neighboring gene
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BMC Genomics

ISSN: 1471-2164

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