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Fig. 5 | BMC Genomics

Fig. 5

From: Mapping of genetic loci that modulate differential colonization by Escherichia coli O157:H7 TUV86-2 in advanced recombinant inbred BXD mice

Fig. 5

Selected SNPs from the Chr 9 QTL. The SNPs of the parental and BXD strains are identified at 38 nonsynonymous loci of interest. The parental strains are shown first and the BXD strains are listed in order from lowest to highest colonization levels one day post-infection. Low colonization was associated with the D2 haplotype and high colonization was associated with the B6 haplotype. SNP consequence “I”: SNP occurs within an intron. Haplotype “H”: heterozygous; blank white box: unknown

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