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Table 1 Summary of read mapping

From: Identification of alternative splicing events by RNA sequencing in early growth tomato fruits

Sample Replicate Raw read pairs Mapped read pairs Percentage
LA4345 seedling   9,733,364 6,724,767 76.9
LA2397 flower   7,122,453 5,189,153 81.9
LA1589     
Seedling   9,464,816 6,228,539 73.6
2 dpa fruit R1 1,855,723 1,497,635 83.5
  R2 1,477,166 1,191,334 85.0
  R3 1,538,156 1,279,635 86.6
  subtotal 4,871,045 3,968,604 81.5 %
5 dpa fruit R1 4,061,009 3,248,627 84.9
  R2 3,311,563 2,378,533 78.5
  R3 3,998,480 3,225,436 85.8
  subtotal 11,371,052 8,852,596 77.9 %
10 dpa fruit R1 2,980,137 2,344,077 81.9
  R2 3,102,963 2,572,168 86.4
  R3 4,456,793 3,576,141 83.2
  subtotal 10,539,893 8,492,386 80.6 %
Total   43,637,807 33,227,506 76.1 %
  1. The numbers in Bold is the sums of the three replicates for 2, 5 and 10 dpa fruit, respectively