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Table 1 Most enriched gene ontology biological processes after bacterial inoculation sorted by P-value

From: Deep sequencing of the uterine immune response to bacteria during the equine oestrous cycle

Category

Up-regulated after bacterial infectiona

Down-regulated after bacterial infectionb

Oestrus

Dioestrus

Oestrus

Dioestrus

Immune system process

310 (40 %)

241 (31 %)

51 (7 %)

9 (1 %)

Immune response

113 (52 %)

89 (41 %)

5 (2 %)

1 (0 %)

Inflammatory response

50 (57 %)

49 (56 %)

2 (2 %)

0 (0 %)

Response to stress

295 (25 %)

216 (18 %)

132 (11 %)

19 (2 %)

Cytokine-mediated signaling pathway

34 (54 %)

31 (49 %)

4 (6 %)

0 (0 %)

Response to lipopolysaccharide

36 (58 %)

30 (48 %)

4 (6 %)

0 (0 %)

Defense response to virus

28 (54 %)

27 (52 %)

1 (2 %)

0 (0 %)

Innate immune response

25 (69 %)

20 (56 %)

1 (3 %)

0 (0 %)

Positive regulation of B cell proliferation

20 (67 %)

17 (57 %)

0 (0 %)

0 (0 %)

Antigen processing and presentation

41 (55 %)

25 (34 %)

0 (0 %)

0 (0 %)

Positive regulation of I-kappaB kinase/NF-kappaB signaling

48 (42 %)

32 (28 %)

9 (8 %)

0 (0 %)

Antigen processing and presentation of peptide antigen via MHC class I

17 (81 %)

6 (29 %)

0 (0 %)

0 (0 %)

  1. aThe number of genes up-regulated after bacterial infection in each category in oestrus and dioestrus and what percentage that represents of the total number of genes in this category
  2. bThe number of genes down-regulated after bacterial infection in each category in oestrus and dioestrus and what percentage that represents of the total number of genes in this category