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Table 3 KEGG pathway classification of transcriptome (the top 10)

From: RNA-seq reveals differentially expressed genes of rice (Oryza sativa) spikelet in response to temperature interacting with nitrogen at meiosis stage

Number Pathway All genes with pathway annotation (31,242) Pathway ID
1 Metabolic pathways 8,736 (27.96 %) ko01100
2 RNA transport 4,026 (12.89 %) ko03013
3 mRNA surveillance pathway 3,569 (11.42 %) ko03015
4 Endocytosis 3,145 (10.07 %) ko04144
5 Glycerophospholipid metabolism 3,115 (9.97 %) ko00564
6 Biosynthesis of secondary metabolites 3,074 (9.84 %) ko01110
7 Ether lipid metabolism 2,924 (9.36 %) ko00565
8 Plant-pathogen interaction 1,760 (5.63 %) ko04626
9 Spliceosome 1,405 (4.5 %) ko03040
10 Plant hormone signal transduction 1,365 (4.37 %) ko04075
  1. Note: The percentage of annotated unigenes in a pathway to the total number of unigenes is commented the small brackets