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Fig. 3 | BMC Genomics

Fig. 3

From: A comprehensive joint analysis of the long and short RNA transcriptomes of human erythrocytes

Fig. 3

Genomic locations and expression dynamics of noncoding RNAs in the miR-144/451 locus. a Location, sequence read length, relative read number, and vertebrate conservation of noncoding RNAs within the chromosome 17 miR-144/451 locus according to UCSC genome browser (hg38). Solid lines indicate average read numbers, dotted lines represent highest and lowest standard deviations of read numbers across the samples. The strand orientation of each noncoding RNA is indicated. b Expression of miR-144-5p, miR-4732-3p, and miR-4732-5p, during CD34+ erythroid differentiation using progenitors from three different individuals. Differentiation is listed from day 6 to day 16. U6 snRNA was used as a loading control, with fold difference set relative to day 6. c Predicted folding structure for the miR-4732 pre-microRNA according to miRDeep, and frequency of reads for mature microRNAs from one representative sample. The most prevalent mature read sequences for miR-4732-3p (red) and miR-4732-5p (blue) are shown. d Sequence conservation of miR-4732-3p in listed species. Primates are listed adjacent to white box, non-primates listed adjacent to black box. Seed sequence is boxed, and base mismatches with human miR-4732-3p are highlighted in red

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