Transcriptome profiling of a spirodiclofen susceptible and resistant strain of the European red mite Panonychus ulmi using strand-specific RNA-seq

Table 7 Known target sites of acaricides, their T. urticae gene ID and presence in P. ulmi and the IRAC acaricide classes that target these proteins

Target site	T. urticae ^a		P. ulmi ^b	IRAC group	Reference
	gene ID	length (nt)	length (nt)
VGSC	tetur34g00970	6600	6696	3 (Sodium channel modulators)	[66, 69]
AChE	tetur19g00850	2064	2193	1 (AChE inh.)	[70, 72]
ACCase	tetur21g02170	6957	6594	23 (Accase inh.)	[6]
cytB	FJ196444	1063	1041	20 (Mt Complex III inh.)	[67, 68]
CHS1	tetur03g08510	4608	4170	10 (Mite growth inh.)	[22, 24]
GluCl1	tetur02g04080	1338	1335	6 (Cl channel activators)	[23, 71]
GluCl2	tetur08g04990	1368	987
GluCl3	tetur10g03090	1629	1623
GluCl4	tetur22g02450	1325	1344
GluCl5	tetur36g00090	1392	1317
GluCl6	tetur41g00120	1392	-
Rdl1	tetur12g03620	2346	2049
Rdl2	tetur36g00580	1572	1608
Rdl3	tetur36g00590	2187	2019

^a T. urticae gene IDs can be accessed at the ORCAE database (http://bioinformatics.psb.ugent.be/orcae/overview/Tetur) while FJ96444 can be accessed at the NCBI database
^b P. ulmi target site sequences can be found in Additional file 14

ISSN: 1471-2164