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Table 1 Selected pregnancy associated target genes for differentially expressed miRNAs in the porcine endometrium

From: Expression of microRNAs and isomiRs in the porcine endometrium: implications for gene regulation at the maternal-conceptus interface

Functional category

Target genea

DE miRNAs

Prostaglandin signaling and metabolism

PTGS2

miR-758, miR-16, miR-320, let-7a, miR-199a-3p, miR-203

PTGER2

miR-429

PTGFR

miR-23b, miR-92b-3p, miR-205, miR-429

PTGIS

miR-449a, miR-150, miR-200a

PTGIR

miR-1, miR-205

Inflammatory mediators

IL6

let-7e, miR-365-3p, miR-574

IL6R

miR-200a, miR-27a/b, miR-24-3p, miR-342, miR-23b, miR-495, let-7a, miR-17, miR-449a

LIF

miR-106b-5p, miR-27a/b, miR-17-5p, miR-574

LIFR

miR-1, miR-142-3p, miR-342, miR-365-3p, miR-203, miR-30d, miR-27a, miR-23b, miR-205, miR-191, miR-199a-3p

Growth factors, receptors and related proteins

IGF1

miR-1, miR-495, miR-186, miR-486, miR-23b, miR-27a, miR-380, miR-30d, miR-361-5p, miR-16, let-7a

IGF1R

let-7a, miR-100, miR-200a, miR-186, miR-16, miR-30d, miR-96, miR-495, miR-375

IGFBP1

miR-140-3p, miR-205, let-7a

IGFBP3

miR-374a-5p, miR-449a, miR-1249, let-7a

IGFBP5

miR-1, miR-24-3p, miR-146a-5p, miR-193b-3p, miR-203, miR-27a

VEGFA

miR-342, miR-200a, miR-1, miR-1249, miR-186, miR-449a, miR-16, miR-205, miR-203, miR-150, miR-374a-5p, miR-361-5p, miR-17-5p, miR-106b, miR-23b, miR-429

KDR

miR-16, miR-200b, miR-23b

Flt1

miR-96, miR-142-3p, miR-200b, miR-200a, miR-374a-5p, miR-193b-3p, miR-17-5p, miR-106b

FGF7

miR-27a, miR-186, miR-495, miR-199b-3p, miR-361-5p, miR-140, miR-16, miR-132, miR-486, miR-17, miR-429

FGF2

miR-16, miR-23b, miR-203, miR-17

SPRED1

miR-1, miR-96, miR-16, mniR-199a-3p, miR-132, miR-142-3p, miR-200c-3p, miR-17-5p, miR-106b, miR-449a, miR-126

Other

Wnt4

miR-16, miR-186, miR-24-3p, miR-429

Wnt5a

miR-129b, miR-140-3p, miR-374b-5p, miR-200a, miR-92b-3p, miR-365-3p, miR-186, miR-30d, miR-23b, miR-203, miR-205, miR-574

Wnt7a

miR-361-5p, miR-16

CTNNB1

miR-150, miR-200a

CDH1

miR-495, let-7a, miR-23b

HoxA10

miR-27a, miR-374b-5p, miR-16

ESR1

miR-1, miR-17-5p, miR-20a, miR-203, miR-129b, miR-193, miR-106b, miR-23b

PGR

miR-342, miR-129b, miR-96, miR-23b, miR-140-3p, miR-495

  1. aTarget prediction for DE miRNAs was done using IPA and miRWalk, which incorporate information from several algorithms such as: miRanda, TargetScan, miRDB, RNA22, PICTAR or DIANA-microT and miRwalk. miRNA target genes identified by at least three of these algorithms were considered for analysis