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Fig. 6 | BMC Genomics

Fig. 6

From: Extensive variation between tissues in allele specific expression in an outbred mammal

Fig. 6

Using only SNP that could be definitively phased, (a) is a heat map of the paternal allele frequency of the same SNP on chromosome 29 (in SPTY2D1) across all 18 tissues. The frequency of paternal expression is scaled from 0 (100 % maternal, red) to 1 (100 % paternal, blue). b A heat map of the frequency of the paternal allele for all phased SNP, for each tissue. Tissues are clustered on the overall paternal expression as indicated by the dendrogram. SNP are ordered by position and the left hand scales indicate the different (ordered) chromosomes. c Highlights 14 SNP within 5 known genes (GIMAP8, GIMAP7 copy 1, GIMAP4, GIMAP7 copy 2 and GIMAP5, listed within each cell) on chromosome four in the brain caudal lobe, chromosome and position are listed on the right hand side of the expression pattern

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