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Table 4 Transcription factors in CLL regulatory networks after MRA

From: Regulatory network reconstruction reveals genes with prognostic value for chronic lymphocytic leukemia

Network GSE46261

Network GSE39671

Master regulator

FET P-value

Inter-section set

Mode

Master regulator

FET P-value

Inter-section set

Mode

CERS6

9.01E-36

40

+

EGR3

7.36E-17

39

-

TCF7

1.17E-28

37

-

CERS6

8.80E-17

47

+

TLE1

1.66E-16

22

+

PHTF1

1.22E-11

37

+

ZNF135

3.97E-15

21

+

AEBP1

4.51E-10

30

+

MYBL1

4.33E-13

22

-

NR2F6

4.58E-08

20

+

ELK3

3.59E-10

16

+

MYBL1

7.17E-08

26

-

AEBP1

1.11E-09

16

+

ZNF91

8.43E-08

16

-

GFI1

3.00E-09

13

+

TFDP1

3.64E-07

16

+

NCOR2

4.86E-08

12

+

TCF7

5.57E-07

42

-

TRPS1

6.00E-08

11

+

APEX1

2.00E-06

24

+

TSHZ2

3.55E-07

16

-

ZNF354A

3.26E-06

10

+

ARID5B

6.01E-07

9

-

SMARCA4

6.54E-06

39

+

NOD2

7.06E-07

17

+

Network GSE38611

EGR3

1.20E-06

9

-

MYBL1

3.80E-07

6

-

ZNF236

2.13E-06

8

+

CERS6

5.90E-06

4

+

HOXB2

2.76E-06

9

+

Network GSE22762

BRIP1

3.27E-06

15

-

TCF7

3.01E-23

49

-

MTA1

6.51E-06

14

+

EGR3

5.25E-14

23

-

Network GSE2466

CERS6

1.21E-11

21

+

KLF7

2.11E-13

23

-

MYBL1

3.38E-10

24

-

AFF1

1.79E-08

16

-

TCF7L2

3.82E-10

31

-

TCF3

1.26E-07

21

+

MYBL2

8.67E-10

23

+

TCF7

1.77E-05

18

-

AEBP1

1.89E-09

16

+

TLE1

2.72E-05

8

+

TFEC

6.31E-08

12

-

RUNX3

5.22E-05

13

-

PHTF1

8.18E-08

29

+

ZNF135

1.10E-04

8

+

PBX3

7.17E-07

14

+

KLF10

1.85E-04

6

+

EP400

7.72E-07

17

+

CERS6

1.85E-04

6

+

PPARD

5.82E-06

25

-