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Table 3 Candidate type III-secreted proteins identified in X. campestris strains sequenced in this study

From: Genomics and transcriptomics of Xanthomonas campestris species challenge the concept of core type III effectome

Name Related proteins or synonyms XcNP CFBP5825Ra Xci CFBP1606Rb Xci CFBP2527Rc Xcr CFBP5828Rd
Candidate type III effectors    
AvrBs2 - 00540 00930 43790 -e
AvrXccA2 - - - - 19470
Hax TAL, Pth, AvrBs3 44610 44690 - -
XopB HopD1 - - 40770 -
XopD1 - - 12980   -
XopD2     31530  
XopE2 AvrXccE1, HopX - - 02540 -
XopE3 AvrXacE2, HopX - 21880 - -
XopF1 Hpa4 32150 31370 12940 31070
XopG HopH, HopAP 09520 09650 34800 -
XopK - 13060 12950 31570 -
XopL XopLR - - - 42660
XopN HopAU1 02730 02740 41710 -
XopP Hlk 31830 31700 12620 30750
XopQ HopQ1, RipB - - 14830 -
XopR - 02980 - 41450 03860
XopX1 HopAE1 05660 05860 38620 -
XopX2 HopAE1 05670 05870 38610 -
XopZ1 HopAS1 21660 36240 30390 -
XopAC AvrAC 16640 16480 - 17460
XopAD RSc3401 - - 12990 31140
XopAE HpaF/G, PopC - 02610 33570 -
XopAG AvrGf1, HopAG - - 38380 -
XopAL1 Eop3 31840 31680 12630 30770
XopAL2 Eop3 17770 17290 27190 -
XopAM HopR1 33630 29860 14610 -
XopAR - - 04830 39670 05760
XopAT - - - 12980 31130
Other type III-secreted proteins    
HrpW PopW 32140 31380 12930 31060
XopA Hpa1 31930 31590 12720 30850
HpaA - 32090 31430 12880 31010
  1. aLocus tag number prefix: XCCFBP5825_m001
  2. bLocus tag number prefix: XCICFBP1606_m001
  3. cLocus tag number prefix: XCICFBP2527_m001
  4. dLocus tag number prefix: XCRCFBP5828_m001
  5. enot detected