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Table 3 Candidate type III-secreted proteins identified in X. campestris strains sequenced in this study

From: Genomics and transcriptomics of Xanthomonas campestris species challenge the concept of core type III effectome

Name

Related proteins or synonyms

XcNP CFBP5825Ra

Xci CFBP1606Rb

Xci CFBP2527Rc

Xcr CFBP5828Rd

Candidate type III effectors

   

AvrBs2

-

00540

00930

43790

-e

AvrXccA2

-

-

-

-

19470

Hax

TAL, Pth, AvrBs3

44610

44690

-

-

XopB

HopD1

-

-

40770

-

XopD1

-

-

12980

 

-

XopD2

   

31530

 

XopE2

AvrXccE1, HopX

-

-

02540

-

XopE3

AvrXacE2, HopX

-

21880

-

-

XopF1

Hpa4

32150

31370

12940

31070

XopG

HopH, HopAP

09520

09650

34800

-

XopK

-

13060

12950

31570

-

XopL

XopLR

-

-

-

42660

XopN

HopAU1

02730

02740

41710

-

XopP

Hlk

31830

31700

12620

30750

XopQ

HopQ1, RipB

-

-

14830

-

XopR

-

02980

-

41450

03860

XopX1

HopAE1

05660

05860

38620

-

XopX2

HopAE1

05670

05870

38610

-

XopZ1

HopAS1

21660

36240

30390

-

XopAC

AvrAC

16640

16480

-

17460

XopAD

RSc3401

-

-

12990

31140

XopAE

HpaF/G, PopC

-

02610

33570

-

XopAG

AvrGf1, HopAG

-

-

38380

-

XopAL1

Eop3

31840

31680

12630

30770

XopAL2

Eop3

17770

17290

27190

-

XopAM

HopR1

33630

29860

14610

-

XopAR

-

-

04830

39670

05760

XopAT

-

-

-

12980

31130

Other type III-secreted proteins

   

HrpW

PopW

32140

31380

12930

31060

XopA

Hpa1

31930

31590

12720

30850

HpaA

-

32090

31430

12880

31010

  1. aLocus tag number prefix: XCCFBP5825_m001
  2. bLocus tag number prefix: XCICFBP1606_m001
  3. cLocus tag number prefix: XCICFBP2527_m001
  4. dLocus tag number prefix: XCRCFBP5828_m001
  5. enot detected