Table 2 Assembly statisitics and features of the Lysobacter genome sequences

Sequencing platform

HiSeq 2000

PacBio P5C3

HiSeq 2500

PacBio P5C3

Illumina GAIIx

PacBio P5C3

HiSeq 2000

Asssembly statistics

Genome size (Mb)

5.77

5.91

5.53

6.39

6.32

6.06

6.16

# scaffolds

1

1

-

1

-

1

1

# contigs

1

1

168

1

142

1

1

Number of Reads

-

106 778

11 524 134

114 536

7 512 266

112 495

-

N50 Read Length

-

15 230

60 432

14 389

139 986

14 221

-

Mean Read Length

-

11 242

-

10 633

-

10 363

-

GC%

67.0

66.8

67.1

66.6

66.4

66.5

69.8

Genomic features

Coding DNA sequences (CDSs)

5178

5143

4056

5685

5448

5322

5547

# hypothetical proteins

1338

1832

-

2123

-

1845

2088

rRNA number

9

6

-

6

7

6

6

tRNA number

55

51

-

52

85

51

60