ID | Genome name | Genome size (bp) | Domain | Phylum | Class | Proportion UM community (%) |
---|---|---|---|---|---|---|
ACI_CAP | Acidobacterium capsulatum ATCC 51196 | 4127356 | Bacteria | Acidobacteria | Acidobacteriae | 8.1 |
AKK_MUC | Akkermansia muciniphila ATCC BAA-835 | 2664102 | Bacteria | Verrucomicrobia | Verrucomicrobiae | 0.9 |
ANE_THE | Anaerocellum thermophilum Z-1320, DSM 6725 | 2919718 | Bacteria | Firmicutes | Clostridia | 1.2 |
BAC_THE | Bacteroides thetaiotamicron VPI-5482 | 6293399 | Bacteria | Bacteroidetes | Bacteroidia | 0.2 |
BAC_VUL | Bacteroides vulgatus ATCC 8482 | 5163189 | Bacteria | Bacteroidetes | Bacteroidia | 0.9 |
BOR_BRO | Bordetella bronchiseptica RB50 | 5339179 | Bacteria | Proteobacteria | Betaproteobacteria | 9.2 |
BUR_XEN | Burkholderia xenovorans LB400 | 973113 | Bacteria | Proteobacteria | Betaproteobacteria | 2.6 |
CAL_SAC | Caldicellulosiruptor saccharolyticus DSM 8903 | 2970275 | Bacteria | Firmicutes | Clostridia | 2 |
CHL_TEP | Chlorobaculum tepidum TLS | 2154946 | Bacteria | Chlorobi | Chlorobia | 0.5 |
CHL_LIM | Chlorobium limicola DSM 245 | 2763181 | Bacteria | Chlorobi | Chlorobia | 0.4 |
CHL_PHA226 | Chlorobium phaeobacteroides DSM 266 | 3133902 | Bacteria | Chlorobi | Chlorobia | 1.9 |
CHL_PHA265 | Chlorobium phaeovibrioides DSM 265 | 1966858 | Bacteria | Chlorobi | Chlorobia | 0.3 |
CHL_AUR | Chloroflexus aurantiacus J-10-fl | 5258541 | Bacteria | Chloroflexi | Chloroflexi | 0.9 |
CLO_THE | Clostridium thermocellum ATCC 27405 | 3843301 | Bacteria | Firmicutes | Clostridia | 0.6 |
DEI_RAD | Deinococcus radiodurans R1 | 3284156 | Bacteria | Thermi | Deinococci | 1.7 |
DES_DES | Desulfovibriodesulfuricans ATCC 27774 | 2873437 | Bacteria | Proteobacteria | Deltaproteobacteria | 1.4 |
DES_PIG | Desulfovibrio piger ATCC 29098 | 2826240 | Bacteria | Proteobacteria | Deltaproteobacteria | 3.1 |
DIC_TUR | Dictyoglomus turgidum DSM 6724 | 1855560 | Bacteria | Dictyoglomi | Dictyoglomia | 3.5 |
ENT_FAE | Enterococcus faecalis V583 | 3359974 | Bacteria | Firmicutes | Bacilli | 4.3 |
FUS_NUC | Fusobacterium nucleatum ATCC 25586 | 2174500 | Bacteria | Fusobacteria | Fusobacteria | 0.3 |
GEM_AUR | Gemmatimonas aurantiaca T-27T | 4636964 | Bacteria | Gemmatimonadetes | Gemmatimonadetes | 0.7 |
HER_AUR | Herpetosiphon aurantiacus ATCC 23779 | 6785430 | Bacteria | Chloroflexi | Chloroflexi | 1.8 |
HYD_Y04AAS1 | Hydrogenobaculum sp. Y04AAS1 | 1559514 | Bacteria | Aquificae | Aquificae | 1.1 |
LEP_CHO | Leptothrix cholodnii SP-6 | 4909403 | Bacteria | Proteobacteria | Betaproteobacteria | 1.8 |
NIT_EUR | Nitrosomonas europaea ATCC 19718 | 2812094 | Bacteria | Proteobacteria | Betaproteobacteria | 4.3 |
NOS_PCC7120 | Nostoc sp. PCC 7120 | 7211789 | Bacteria | Cyanobacteria | unclassified | 2.7 |
PEL_PHA | Pelodictyon phaeoclathratiforme BU-1 | 3018238 | Bacteria | Chlorobi | Chlorobia | 0.1 |
PER_MAR | Persephonella marina EX-H1 | 2467104 | Bacteria | Aquificae | Aquificae | 5.5 |
POR_GIN | Porphyromonas gingivalis ATCC 33277 | 2354886 | Bacteria | Bacteroidetes | Bacteroidia | 0.2 |
RHO_BAL | Rhodopirellula baltica SH 1 | 7145576 | Bacteria | Planctomycetes | Planctomycetacia | 1 |
RHO_RUB | Rhodospirillum rubrum ATCC 11170 | 4406557 | Bacteria | Proteobacteria | Alphaproteobacteria | 1.2 |
RUE_POM | Ruegeria pomeroyi DSS-3 | 4601053 | Bacteria | Proteobacteria | Alphaproteobacteria | 0.6 |
SAL_ARE | Salinispora arenicola CNS-205 | 5786361 | Bacteria | Actinobacteria | Actinobacteria | 0.5 |
SAL_TRO | Salinispora tropica CNB-440 | 5183331 | Bacteria | Actinobacteria | Actinobacteria | 1.6 |
SHE_BAL_OS185 | Shewanella baltica OS185 | 5312910 | Bacteria | Proteobacteria | Gammaproteobacteria | 3.1 |
SHE_BAL_OS223 | Shewanella baltica OS223 | 5358884 | Bacteria | Proteobacteria | Gammaproteobacteria | 1.4 |
SUL_EE.36 | Sulfitobacter sp. EE-36 | 3547243 | Bacteria | Proteobacteria | Alphaproteobacteria | 2 |
SUL_NAS.14.1 | Sulfitobacter sp. NAS-14.1 | 4002069 | Bacteria | Proteobacteria | Alphaproteobacteria | 4.3 |
SUL_YO3AOP1 | Sulfurihydrogenibium sp. YO3AOP1 | 1838442 | Bacteria | Aquificae | Aquificae | 1.6 |
SUL_YEL | Sulfurihydrogenibium yellowstonense SS-5 | 1534471 | Bacteria | Aquificae | Aquificae | 2.6 |
THE_PSE | Thermoanaerobacter pseudethanolicus ATCC 33223 | 2362816 | Bacteria | Firmicutes | Clostridia | 0.8 |
THE_NEA | Thermotoga neapolitana DSM 4359 | 1884562 | Bacteria | Thermotogae | Thermotogae | 0.7 |
THE_PET | Thermotoga petrophila RKU-1 | 1824357 | Bacteria | Thermotogae | Thermotogae | 1 |
THE_RQ2 | Thermotoga sp. RQ2 | 877693 | Bacteria | Thermotogae | Thermotogae | 3.4 |
THE_THE | Thermus thermophilus HB8 | 2116056 | Bacteria | Thermi | Thermi | 0.5 |
TRE_DEN | Treponema denticola ATCC 35405 | 2843201 | Bacteria | Spirochaetes | Spirochaetes | 0.2 |
TRE_VIN | Treponema vincentii I | 2512734 | Bacteria | Spirochaetes | Spirochaetes | 0.2 |
ZYM_MOB | Zymomonas mobilis mobilis ZM4 | 2223497 | Bacteria | Proteobacteria | Alphaproteobacteria | 0.8 |
ARC_FUL | Archaeoglobus fulgidus DSM 4304 | 2178400 | Archaea | Euryarchaeota | Archaeoglobi | 0.3 |
IGN_HOS | Ignicoccus hospitalis KIN4/I | 1297538 | Archaea | Crenarchaeota | Thermoprotei | 1.2 |
MET_JAN | Methanocaldococcus jannaschii DSM 2661 | 1664970 | Archaea | Euryarchaeota | Methanococci | 0.9 |
MET_MAR_C5 | Methanococcus maripaludis C5 | 1780761 | Archaea | Euryarchaeota | Methanococci | 0.4 |
MET_MAR_S2 | Methanococcus maripaludis S2 | 1661137 | Archaea | Euryarchaeota | Methanococci | 0.5 |
NAN_EQU | Nanoarchaeum equitans Kin4-M | 490885 | Archaea | Nanoarchaeota | Nanoarchaea | 1 |
PYR_AER | Pyrobaculum aerophilum IM2 | 2222430 | Archaea | Crenarchaeota | Thermoprotei | 0.5 |
PYR_CAL | Pyrobaculum calidifontis JCM 11548 | 2009313 | Archaea | Crenarchaeota | Thermoprotei | 2.6 |
PYR_HOR | Pyrococcus horikoshii OT3 | 1738505 | Archaea | Euryarchaeota | Thermococci | 1.9 |
SUL_TOK | Sulfolobus tokodaii 7(S311) | 2694756 | Archaea | Crenarchaeota | Thermoprotei | 0.7 |