Features | Daldinia eschscholtzii | |
---|---|---|
UM 1400 | UM 1020 | |
Reads from small-insert library (Gb) | 2.32 | 4.38 |
Reads from large-insert library (Gb) | 1.48 | - |
Total Reads (Gb) | 3.80 | 4.38 |
Assembly size (Mb) | 35.8 | 35.5 |
Number of contigs (≥200 bp) | 1939 | 640 |
Contigs size (N50) (bp) | 33,562 | 112,742 |
GC content of contigs (%) | 46.80 | 46.81 |
Number of scaffolds (≥1000 bp) | 104 | 598 |
Scaffolds size (N50) (bp) | 701,334 | 114,605 |
GC content of scaffolds (%) | 46.51 | 46.80 |
Number of predicted genes (≥99 bp) | 10,822 | 11,120 |
Average gene length (bp) | 1483 | 1616 |
Average number of exons per gene | 2.87 | 2.82 |
CEGMA completeness score calculated from the complete gene set (%) | 94.76 | 96.37 |
CEGMA completeness score calculated from both complete and partial gene sets (%) | 96.77 | 97.18 |
rRNA | 29 | 28 |
tRNA | 168 | 156 |
Repetitive sequence (%) | 1.02 | 1.42 |
Functional annotationa | 3357 | 1974 |
KEGG | 975 | 998 |
GO | 6471 | 6223 |
KOG | 6168 | 6195 |
Pfam | 7690 | 7725 |