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Table 1 Statistics of the assembled T. thynnus sequences

From: Development and validation of a mixed-tissue oligonucleotide DNA microarray for Atlantic bluefin tuna, Thunnus thynnus (Linnaeus, 1758)

Raw data

 

 Number of reads

976,904

 Mean read size

347

 Total size of reads

338,522,590

After assembly (no singletons)

 

 Number of transcripts

70,108

 Mean size

593

 Total size of transcripts

41,564,882

After assembly (singletons only)

 

 Number of transcripts

52,452

 Mean size

431

 Total size of transcripts

22,601,482

After filtering (>500 b)

 

 Number of transcripts

33,105

 N50

870

 Total size of transcripts

29,512,631

 Shortest transcript

500

 Longest transcript

4,955

 Mean size

893

 Median size

799

 Mean GC%

43.5 %

 N%

0.2 %