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Table 1 Characteristics of the 231 putative novel genes in comparison with annotated P. falciparum genes

From: Analysis of nucleosome positioning landscapes enables gene discovery in the human malaria parasite Plasmodium falciparum

  Average RNA-seq coverage Average Poly-seq coverage Average GC% Average length (bp) Avgerage Nuc coverage (B1) Average Nuc coverage (B2) Average H2A.z coverage Average H3K36me3 coverage Average H3K4me3 coverage n
Exon 58 30 27 949 35 77 20 41 84 14,795
Gene 75 34 23 2,494 37 69 17 50 83 5,680
Intergenica 3 7 13 1,000 8 37 31 10 22 1,565
Published lncRNA [17, 3336] 10 7 15 1,114 12 47 35 16 37 986
Predicted genes (B1) 13 4 18 934 22 62 29 25 63 97
Predicted genes (B2) 9 5 16 1,010 17 62 35 18 49 201
All predicted genes (B1 + B2) 8 4 16 1,004 17 62 34 19 50 231
  1. aIntergenic regions were defined as the middle 1 kb of all non-coding regions longer than 1,500 bp that do not overlap with annotated genes, predicted genes, or previously identified lncRNAs